Mesomycoplasma neurolyticum: NCTC10166_00411
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Entry
NCTC10166_00411 CDS
T06888
Symbol
deaD
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mnu
Mesomycoplasma neurolyticum
Pathway
mnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10166_00411 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnu03019
]
NCTC10166_00411 (deaD)
03009 Ribosome biogenesis [BR:
mnu03009
]
NCTC10166_00411 (deaD)
Enzymes [BR:
mnu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC10166_00411 (deaD)
Messenger RNA biogenesis [BR:
mnu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC10166_00411 (deaD)
Ribosome biogenesis [BR:
mnu03009
]
Prokaryotic type
rRNA helicases
NCTC10166_00411 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HEM4
DUF7225
AAA_19
Sad1_UNC
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
VEU59438
UniProt:
A0A449A5C4
LinkDB
All DBs
Position
1:478245..479684
Genome browser
AA seq
479 aa
AA seq
DB search
MNFKDLNLSKKMLKTLENIGFDKPTLIQEKVIKLALEGNDIIGQAQTGTGKTAAFAIPII
ENTILNDLNIQHLILAPTRELANQIADQFVMLSENYPEIKIGTIIGGMSYDKQSKTLKNK
PHILIATPGRLLDLLNKTEFKNKIDLLNVKSLTLDEADELLKVGFFDEIQKILEFLPYKR
QNFFFTATFDKKTKKLSEIITNNAKNITVSEGKKTANSIKQEFVVLKEKNKFISLIKFLE
LNSPKSVVIFGRTKKRVDELTEALKSLKFKVAGIQGDLLQKERNKIIERFRKKEVKILVA
TDVMARGIDVEHIEWVINFDLPQETEYYTHRIGRTGRAGKNGYSLSFVKPDEILHLEKIA
VDTFSTIEEILVPAENELKKIWNNKIFKKFEKILHESQTLENTSIKDELMKKYNSEELAF
ILADYISESKKYEKNIKLTPEPSVVIKKAKNTLDNKKIDNKKKKRKFLDKKIDKKIKQR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaaagatttaaatcttagtaaaaaaatgctaaaaacattagaaaatattggt
tttgataaaccaacattaattcaagaaaaagtaataaaattagctcttgaaggtaatgac
attattggacaagcacaaacaggaacaggaaaaacagctgcttttgcaattccaattatt
gaaaacacaattttaaatgatttaaatatccaacatttaattttagcccctacaagagaa
ttagctaatcaaattgctgatcaatttgttatgctatcagaaaactatcctgaaattaaa
ataggtacaattatcggtggtatgagctatgataaacaaagcaaaacacttaaaaataaa
ccacatattttaatcgcaaccccaggtagattattagatttattaaataaaacagaattt
aaaaataaaattgatttattaaatgttaaatcacttacattagatgaggctgatgaatta
ttaaaagttggtttttttgatgaaattcaaaaaattcttgaatttttaccttacaaaagg
cagaactttttctttactgcaacatttgataaaaaaacaaaaaaacttagcgaaattatt
actaataatgctaaaaatattactgtatcagaaggaaaaaaaacagctaattctattaag
caagaattcgttgttttaaaagaaaaaaacaaatttatttctttaataaaatttttagaa
ttaaacagccctaaatctgttgttattttcggaagaaccaaaaaaagagtagatgaacta
accgaggctttaaaatcattaaaatttaaagttgctggaattcagggtgatttattacaa
aaagaaagaaataaaataattgaaagatttagaaaaaaagaagttaaaattttagttgcc
acagatgtaatggcacgtggaatagatgtagaacacattgagtgagttataaattttgac
ttaccacaagaaactgaatattatacacatagaattggaagaacagggcgcgctggtaaa
aatggatattctctttcttttgttaaaccggatgaaattttacatttagaaaaaattgct
gttgatactttttcaacaatcgaagaaatacttgtacctgctgaaaatgaattaaaaaaa
atatgaaacaataaaatttttaaaaaatttgaaaaaattttacatgaaagtcaaacttta
gaaaatacttctattaaagatgaattaatgaaaaaatacaactctgaagaacttgcattt
attttagcagattatatttccgaaagtaagaaatatgaaaaaaacataaaacttacacct
gaacctagtgtagttattaaaaaagcaaaaaatactttagataataaaaaaattgataat
aagaaaaagaaaagaaaatttttagataaaaaaattgataaaaaaataaaacaaagataa
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