KEGG   Mycobacterium noviomagense: MNVI_04590
Entry
MNVI_04590        CDS       T06809                                 
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
mnv  Mycobacterium noviomagense
Pathway
mnv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mnv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MNVI_04590 (deaD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mnv03019]
    MNVI_04590 (deaD)
   03009 Ribosome biogenesis [BR:mnv03009]
    MNVI_04590 (deaD)
Enzymes [BR:mnv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     MNVI_04590 (deaD)
Messenger RNA biogenesis [BR:mnv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     MNVI_04590 (deaD)
Ribosome biogenesis [BR:mnv03009]
 Prokaryotic type
  rRNA helicases
   MNVI_04590 (deaD)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII Cas3-like_C_2 CMS1 adh_short
Other DBs
NCBI-ProteinID: BBY05141
UniProt: A0A7I7P992
LinkDB
Position
complement(540238..542007)
AA seq 589 aa
MAVPLTTVSLATATKLGLQMTSPDTAAETSPATFDDLQIHPSVLRAIVDVGYETPSAIQA
ATIPALMAGSDVVGLAQTGTGKTAAFALPILSKIDTTSNATQALVLAPTRELALQVSEAF
SRYAAHLPRLTVLPIYGGASYGVQLAGLKRGAHVVVGTPGRVIDHLDRGTLDLSRVDYLV
LDEADEMLAMGFADDVERILSDTPEYKQVALFSATMPPAIRKLTTKYLHDPLEVTVEAKT
TTAENISQRYIQVAGPRKMDALTRILEVEPFDAMIVFVRTKQATEEVAERLRARGFSAAA
INGDIPQAHRERTIAALREGGAGGIDILVATDVAARGLDVDRISHVLNYDIPHDTESYVH
RIGRTGRAGRSGTALLFVAPRERHLLKAIEKATRQKLVEAELPTVEDVNAQRVAKFADSI
TDALSSPGIELFRSLVEDYEREHDVPMADIAAALALQSRDGEDFLMSPEPPEPRRADRRT
EKPARKPRERTKDGFATYRIAVGKRHRVGPGAIVGAIANEGGLHRSDFGHITIGPDYSLV
ELPAQLPRATLKALERTRISGVLINLRPDRPSRDGRRRDSGKPRRKSAG
NT seq 1770 nt   +upstreamnt  +downstreamnt
gtggccgtgccgctaacaaccgtgtcgctcgcaaccgccactaaactcggtcttcaaatg
acctcaccagataccgcggccgagacgtccccggccaccttcgacgacctgcagatccat
ccatcggttctgcgggcaattgtcgacgtcgggtatgagacaccatcggccatccaggcg
gccacgatcccggcgttgatggccggttccgacgttgtgggcctggcacagacaggcacc
ggcaaaacggcggccttcgctcttccgatcctgtccaagatcgacaccaccagcaatgcg
acgcaagcattggtgctggcgccgacgcgcgaactggctctgcaagtgtcggaggcgttc
agccgctacgccgcgcacttgccgcggcttaccgtgctgccgatctatggcggagcttct
tacggcgtgcagttggccggactgaaacgcggcgcccacgtcgtggtcggaacacccggg
cgggtcatcgatcacctcgaccgcgggacgctggatctgtcccgggtggactatctggtg
ctcgacgaagccgacgaaatgctggccatgggtttcgccgacgacgtcgaacgcatcctg
tcggacaccccggaatacaaacaggtcgcgttgttctcggcgaccatgccgccggcgatc
cgcaagctcactaccaagtacctgcatgacccgctcgaagtcactgtcgaagccaaaaca
acgacagcagagaatatttcgcagcgctacatccaagtagccggtccgcgaaagatggac
gcgctgacccgaatactcgaagttgagccgttcgacgcgatgatcgtcttcgtccgcacc
aagcaggccaccgaagaggtcgccgaaagattgcgtgcccgaggcttttccgcagcggcc
atcaacggcgatatcccacaggcccatcgggagcgcacgatagcggcgctgcgggaaggc
ggggcaggcggtatcgacatcctggttgccaccgacgtcgcggcccgcggtctggatgtg
gaccgaatctcgcatgtgctcaactacgacatcccgcacgacaccgagtcttacgtgcac
cgcatcggacgcaccggccgggccggacgttcgggaaccgcactgctgttcgtcgcaccg
cgtgagcgccacctgctcaaggcgatcgaaaaggcaacgcgccaaaagctcgtcgaggcc
gaactgcccaccgtcgaggacgtcaacgcgcaacgggtagccaaattcgccgactccatc
accgacgcgctcagctcaccgggcatcgagctgttccgcagcctggtcgaggactacgaa
cgcgaacacgacgttcccatggccgacatcgccgcggctctggcgttgcagtcccgcgac
ggcgaggacttcttgatgtcgccggaacctccggagccacgccgcgccgaccgccggacc
gagaagccggcgcgcaagccgcgagagcgcaccaaagacgggtttgccacttaccgtatc
gccgtgggcaagcggcaccgggtcggcccgggagcgatcgtcggcgctatcgcgaacgag
ggcggtttgcaccgcagcgatttcggccacatcacgatcggacccgactactccttggtg
gagctgccggcccagttgccgcgcgccacgctgaaggcgctcgaacggacccgcatctcc
ggtgtgctgatcaacctgcggccggaccggccctcacgcgatggccgccgccgcgacagc
ggtaagccgcggcggaaatcagccggatga

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