Mycobacterium noviomagense: MNVI_05760
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Entry
MNVI_05760 CDS
T06809
Symbol
rtcB
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mnv
Mycobacterium noviomagense
Brite
KEGG Orthology (KO) [BR:
mnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mnv03016
]
MNVI_05760 (rtcB)
Enzymes [BR:
mnv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MNVI_05760 (rtcB)
Transfer RNA biogenesis [BR:
mnv03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MNVI_05760 (rtcB)
Prokaryotic type
tRNA splicing ligases
MNVI_05760 (rtcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
BBY05258
UniProt:
A0A7I7P9K4
LinkDB
All DBs
Position
669089..670510
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AA seq
473 aa
AA seq
DB search
MKLVQETPFRFRIDPSGAMRVPGVIFASSSLLPDTNREPLLRQVANVATLPGIVEASYAM
PDIHLGYGFPIGGVAATDIRDGGVISPGGVGFDISCGVRLLSADLERTEFAKVARVVMDL
LSKRIPRGAGPGAVRSPVSDNELNHVLRGGSRYVVEHGDGSELDLERCEDGGAFDEADPS
AISQRARERGRHQLGSLGSGNHFLEVQHVVEVSDEPVAKAFGLRAGQVCVMIHCGSRGLG
HQICTDEVHAMDRAMERHKVQVPDRQLACVPMDSAEGRRYLAAMYAAANYARANRQILGR
AASEVFRSATGNGLELVYDISHNLARIERHDVGGQLLDLCVHRKGATRALPPGHAKLPTD
LADVGQPVLIPGSMGTASYVLAGVTGGGAFHSTCHGAGRRLSRHQAARSVSPNELREQLE
RRQKILVRGASKRGLVEEAPAAYKDVSEVVAVAEQAGLCRTVARLEPLGVVKG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagtgcaggaaacaccgtttcggtttcgcatcgacccgtccggcgcaatgcgc
gtgccgggagtgatcttcgcgtcgtcgtcgctgctgcccgacaccaaccgcgaacccctg
ctgcggcaggtggcgaacgtcgcgaccttgccgggcattgtcgaggcgtcgtacgcgatg
cccgacatccatctgggctacggcttcccgatcggcggcgtggccgcgaccgacatccgc
gacggcggcgtgatctcgcccggcggtgtgggattcgacatctcctgcggtgtgcggctg
ctgtcagccgatctcgaacggactgagttcgccaaagttgcccgggtggtgatggatctg
ttgagcaaacgcattccccgtggtgcgggaccgggagcggtgcgctcgccggtcagcgac
aacgagttgaatcacgtgctgcgcggcggttctcggtacgtggtcgagcacggtgacggg
tcagagctcgacttagagcgctgcgaggacggcggcgcgttcgacgaggctgacccgtcc
gcgatcagccagcgagcgcgggagcggggtcgccaccagctcggcagccttggctccggc
aatcatttcctggaggtccagcatgtggtcgaagtgtccgacgagcccgttgccaaggct
ttcgggctgcgcgccggccaagtatgcgtgatgatccactgcggatcgcgtggactcgga
catcagatctgcaccgacgaagtgcacgcgatggaccgtgccatggagcgccataaagtg
caggtccctgatcggcaattagcttgcgtgccaatggattcagccgaaggtcgccgctac
ctggcggcgatgtatgcagcggcgaactacgcgcgcgccaaccggcagatcctcggcagg
gccgcatcggaggtgtttcggtcggccaccggcaacggattggaattggtttacgacatt
tcgcataacctcgcccggatcgaacggcacgatgtcggaggacagctgctcgacctttgt
gtgcaccgcaagggcgcgacccgggcgctgccgcccgggcacgcaaaactgccaacggat
ttggctgatgtcggccaacccgtgttgataccggggtcgatggggaccgcgtcatatgta
ttggctggggtgactggtggcggtgcgtttcattcgacctgtcacggcgccggtaggcgg
ctgagccgccatcaagcggcccgctcggtatcgccgaacgaattgcgcgagcaactggaa
cgacgacagaagatcctcgtccgtggcgcgtcgaaacgcggactggtcgaagaggcgccc
gcggcctacaaggacgtttcggaggttgtcgcggtcgccgaacaggcgggcctatgtcgc
actgtggcccgactggaaccgctgggcgtggtgaagggttga
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