Mycobacterium noviomagense: MNVI_27860
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Entry
MNVI_27860 CDS
T06809
Symbol
sigF
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
mnv
Mycobacterium noviomagense
Brite
KEGG Orthology (KO) [BR:
mnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnv03021
]
MNVI_27860 (sigF)
Transcription machinery [BR:
mnv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MNVI_27860 (sigF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_3
HTH_23
HTH_24
MarR
Sigma70_ECF
HTH_Crp_2
HTH_20
MarR_2
HTH_IclR
DUF7343
KORA
HTH_31
Motif
Other DBs
NCBI-ProteinID:
BBY07468
UniProt:
A0A7I7PFS3
LinkDB
All DBs
Position
2952962..2953753
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AA seq
263 aa
AA seq
DB search
MTARAVGGSGSRQNEYADVPDLFRELASLPPNSPEFQRQRDKIVERCLPLADHIARRFEG
RGEPRDDLVQVARVGLVNAVVRFDVEAGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRRL
KELHLRLGTATADLSQRLGRAPTATELADELDMDRTEIVEGLVAGSSYNTLSIDSGGGGS
ADDDARAIADTLGDVDTGLERIENREALRPLLDALPERERTVLVLRFFESMTQTQIAERV
GISQMHVSRLLAKSLARLRDQLE
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcgcgagctgtcggcggttctggttcacgacagaatgagtacgccgacgttccc
gacctgttccgtgaactggccagcctcccaccgaactcaccggaattccagcggcagcgc
gacaaaatcgtcgagcgctgcctcccactcgccgatcacatcgcccgccgattcgagggc
cgcggcgagccgcgcgacgacctcgttcaggtagcgcgggtcgggctggtcaacgcggtg
gtccgcttcgacgtcgaagccggctcggacttcgtgtcgttcgcggtgcccaccatcatg
ggggaggtccggcgacactttcgcgacaacagctggtcagtgaaggtgccgcggcgcctg
aaggaactgcacttgcgactcggcactgctaccgccgacttgtctcaacggctgggccga
gcacctaccgccaccgagctcgcagacgaactcgacatggaccgtacggaaatcgtcgaa
ggactggttgcgggcagctcctacaacacgttgtcgatcgacagcggtggcggcggcagc
gcggacgatgatgcccgcgccatcgctgacaccctcggtgacgtggacaccggcctagag
cggatcgaaaaccgcgaggccttgcgtccgctgctggacgcgctgcccgaacgggagcgg
acggtgttggtgctcaggttcttcgagtcgatgacgcagacccagatcgccgagcgggtc
ggcatctcgcagatgcatgtgtcccgtctgctggctaaatcgttagcgagactgcgggac
cagctggagtag
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