Mycobacterium noviomagense: MNVI_28880
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Entry
MNVI_28880 CDS
T06809
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mnv
Mycobacterium noviomagense
Pathway
mnv03420
Nucleotide excision repair
mnv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mnv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MNVI_28880
03430 Mismatch repair
MNVI_28880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnv03400
]
MNVI_28880
Enzymes [BR:
mnv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MNVI_28880
DNA repair and recombination proteins [BR:
mnv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MNVI_28880
MMR (mismatch excision repair)
Other MMR factors
MNVI_28880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BBY07570
UniProt:
A0A7I7PG54
LinkDB
All DBs
Position
3046787..3050065
Genome browser
AA seq
1092 aa
AA seq
DB search
MTPTPRYSPSELACALGLLEPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVAN
GYASPDQVLGLTFTRKAAGQLLRRVRSRLARLAGVGMATAGRAAQEPTAGPAVSTYHAFA
GSLLREHGLLLPVESDSRLLSETELWQLAFDVVSGYRGELRTDKSPAAVTAMVLRLWSQL
TEHLVDTDQLRDTHLELEQLVHTLPAGPYQRERGPSQWLLRLLATQTERAELVPLVDALH
RRMLTEKVVDFGLQMASAARLASSFPQVGAQLRERYRVVLLDEYQDTGHAQRVALSTLFG
GGVDDELALTAVGDPIQSIYGWRGASATNLPRFATDFPRSDGSPAPILELRTSWRNPPRI
LHLANAVSAEARRRSVAVRALRARPDAPPGAVRVALLSDVQAEREWIADHLHRLYQRCRV
GGVAAPTVAVLVRRNADAAPMADVLRARGVPVEVVGLAGLLSIPEVADVVATLRLVADPT
AGAAAMRVLTGPRWRLGARDIAALWRRAQELGGHPQRGPALTAEQLAAESGPDADSACLA
DAISDPGPAGEYSAPGYQRILALADELAGLRGHLDHPLPELVAEVRRVLGVDCEARALQP
SRAEWAGAEHLDAFADVVSAYAERAVTSPALCPASVAGLLAYLDTAAVVENGLPPAQLTV
AADRVQVLTVHAAKGLEWQVVAVPHLSAGVFASTASTRTWLTDPADLPPLLRGDRASAGA
HGVPVLDTSDVTNRKQLSDTISAHRRQLEQRRVDEERRLLYVAITRAEDTLLVSGHHWGA
TGIKPRGPSDFLCELKDVVDRSAAAGEPCGVVEQWAPPPATGEPNPLRDTVIEAVWPADP
LGARRRDVERGAALVAAAMSADAPTGADITQWVADVDALLAERTRDPQQPAAALPNQLSV
SDVVELGRNPSAARQRLTRRLPARPEPHTLLGSAFHDWVQRFYGAERLFDLDDLPGADTG
AAQADAEELAALQAAFTRSPLAARTPVAVEVPFEMAIGETVVRGRIDAVFADPDGGATVV
DWKTGEPPDGPEAMRQAAVQLAVYRLAWAGLQGCPESAVRAAFHYVRTGVTVEPEVLAGP
EELAGLVTDTSV
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
gtgacgccgacgccgcgctacagtccaagcgaattagcctgtgccctaggtcttttggag
ccgactgccgagcaggccgcggtgatcgccgcgccgccgggtccgctggtggtcatcgcc
ggggccggtgcgggcaaaaccgagaccatggccgcgcgggtggtgtggctggtcgccaac
ggttatgcctcgcccgatcaggtgttggggttgacgttcacccgcaaggccgccggtcag
ctgctgcgccgggtccggtcgcggctggcccggctggccggagtcggtatggcaaccgca
ggccgggcagcccaggagccgaccgcgggaccggcggtcagcacgtaccatgcgttcgcc
ggttcgctgctgcgcgaacatggcctgttgctgccggtcgaatccgactcccggctgctc
agcgagaccgagttgtggcagctcgcctttgacgtggtcagcggttaccgcggcgagttg
cgcacggacaagagtccggccgcagtaactgcgatggtgctgcggctgtggagtcagctc
accgagcatctcgtcgacaccgatcagctgcgcgacacccatctggagttagaacagctg
gttcacaccctgccggccggtccataccagcgggagcggggccccagtcagtggctgttg
cggttgctggccacgcagaccgagcgcgcggagttggtgccgctggttgacgcgctgcac
cggcggatgctcaccgagaaggtggtcgacttcggtttgcagatggcctcagcggcgcgg
ctggcatcgagcttcccccaagtcggtgcgcagttgcgcgaacgctatcgggtggtgctg
ctcgacgaataccaggacaccgggcacgcccagcgcgtcgcgttgtcgacgctgttcggt
ggcggggtcgacgacgaactggcgctgacggccgtcggcgacccaatccagtcgatctac
ggctggcgcggtgcctccgcgaccaacctgccgcggttcgccaccgactttccccgatcc
gacggcagccccgcgccgatcctcgagttgcgcacaagctggcgcaacccgccgagaatc
cttcacttggccaacgccgtttccgcagaagcgcggcgccgctcggtcgccgtgcgagcc
cttcgcgcgcgcccagacgccccgccgggcgcagtccgcgtcgccttgctgtccgacgtg
caagctgaacgcgagtggatcgccgaccatctgcaccgcctctaccagcgctgccgcgtc
ggcggcgttgcagcgccgaccgtcgcggtcctggtccggcgcaatgccgacgccgcgccg
atggccgatgtgctgcgtgcccgcggcgtcccggtggaagtggtaggactggccgggctg
ctgtccattcccgaggtggccgacgtggtggcgacgctgcggttggttgccgacccgacc
gccggggcggcggcgatgcgggtgctgaccggtccgcggtggcgactcggggcccgcgac
atcgcggcgttgtggcggcgcgcgcaagaacttggcggccacccgcagcgcgggccggcc
ttgacggccgagcagctcgccgcggagtccggacccgatgccgacagcgcatgcctggcc
gacgcgatcagcgacccgggcccagccggcgagtattcggcgcccggatatcagcgcatc
ctcgcgttggccgacgaactggccggactgcgcggccacctggatcacccgctaccggag
ctggtcgccgaggtgcggcgagtgctgggcgtcgactgcgaggcccgcgcgttgcagccg
agtcgcgccgagtgggccggtgccgagcatctcgacgcgttcgccgatgtcgtctcggcg
tatgcggagcgggccgtcacgtcgccggccctctgcccggcttcggtggccggtctgctg
gcctacctggatacggctgcggtcgtcgaaaacggattaccgcccgcgcagctcaccgtc
gccgcagaccgcgtccaagtgctcacggtgcacgccgcgaagggtttggagtggcaggtg
gtggccgtgccgcacctgtcggccggcgtgtttgcctccaccgcgtcgacacgcacctgg
ctcaccgaccccgccgacctgccgccgctgctgcgcggcgaccgggcgtcggctggcgca
cacggcgtccccgtcctggacacgtcggacgtcaccaaccgaaagcagttgtccgacacg
atctccgcgcatcgccgccaactcgagcaacgccgcgtcgacgaagagcgtcggctgctg
tatgtggccatcacccgagccgaagacaccctgctggtatcgggccatcactggggggcg
accggcatcaaaccacgcggaccgtcggacttcctctgcgaactcaaggacgtcgtcgac
cggtcggccgccgccggcgagccctgcggagtggtggaacagtgggccccaccacccgcc
acgggagaaccgaaccccttgcgcgacacggtgattgaagcagtctggcccgctgacccg
ctgggcgcgcgccgtcgcgacgtcgagcggggagcggcgctggtggccgcggcgatgtca
gcggacgcgccgacgggcgccgacatcacccagtgggtggccgacgtcgatgccctgctt
gccgagcggacacgcgacccgcagcaacccgctgcggcgctgcccaaccagttgtcggtc
agcgatgtggtggagctgggccgcaacccgagcgccgcgcggcagcggctgacccggcgg
ctaccggcacggcccgagccacataccttgctgggcagcgcatttcacgactgggtccag
cggttctacggcgctgagcggctcttcgacctcgacgacctgccaggcgccgacactggc
gccgcacaggccgacgccgaggagctggctgcgttacaggcggcgttcacccggtcaccg
ttggcggcgcgcaccccggtcgcggtcgaagtgccgttcgaaatggccatcggcgagacc
gtggtgcgtggccgcatcgacgcggtgttcgccgacccagatggtggggccaccgtggtg
gactggaagaccggtgaaccaccggacgggccggaggccatgcggcaggccgcggtccag
ctcgccgtctaccggctggcgtgggcgggcttgcagggctgtccggaatccgcggtccgc
gcggccttccactacgtgcgcaccggagtcaccgtcgaaccggaggtgctggcgggaccg
gaggagctggccgggctggtgaccgacacctcggtgtag
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