Mycobacterium noviomagense: MNVI_38240
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Entry
MNVI_38240 CDS
T06809
Symbol
dnaE1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mnv
Mycobacterium noviomagense
Pathway
mnv03030
DNA replication
mnv03430
Mismatch repair
mnv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mnv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MNVI_38240 (dnaE1)
03430 Mismatch repair
MNVI_38240 (dnaE1)
03440 Homologous recombination
MNVI_38240 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnv03032
]
MNVI_38240 (dnaE1)
03400 DNA repair and recombination proteins [BR:
mnv03400
]
MNVI_38240 (dnaE1)
Enzymes [BR:
mnv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MNVI_38240 (dnaE1)
DNA replication proteins [BR:
mnv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MNVI_38240 (dnaE1)
DNA repair and recombination proteins [BR:
mnv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MNVI_38240 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
BBY08506
UniProt:
A0A7I7PIV2
LinkDB
All DBs
Position
3989104..3992634
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AA seq
1176 aa
AA seq
DB search
MTGSFVHLHNHTEYSMLDGAAKISPMLAEAQRLEMSAIGMTDHGNMFGASEFYNACTGAG
IKPIIGVEAYVAPGSRFDSRRILWGDPAQKSDDVSGSGSYTHLTMVAENATGLRNLFKLT
SLASFEGQLGKWSRMDAELIAEHASGIIATTGCPSGEVQTRLRLGQDREALESAARWREI
FGADNYFLELMDHGLSIERRVRDGLLEIGRKLGIAPLATNDCHYVTRDAAHNHEALLCVQ
TGKTLSDPTRFKFEGDGYYLKSAAEMRAIWDAEVPGACDITLLIAERVGSYAEVWTPRNR
MPVFPVPDGHDQASWLRHEVEAGLARRFPDGIPTGYGERAAYEIEVICAKGFPSYFLIVA
DLVNYARSVNIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERTSMPDIDID
FDDRRRGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKAL
PPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLIRNAGVHAC
AVIMSSEPLTDAIPLWKRPQDGAIITGWDYPACEEIGLLKMDFLGLRNLTIIGDAIENIK
ANRGIDVDLESVPLDDPATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTEFEDVVAVIAL
YRPGPMGMNAHNEYADRKNGRQPIKPIHPELAEPLQAILAETYGLIVYQEQIMRIAQKVA
GYSLARADILRKAMGKKKREVLAKEYEGFSAGMKSNGFSDGAVKALWDTILPFADYAFNK
SHAAGYAMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVNE
SGLNFASVGTDIRYGLGAVRNVGANVVASLLKTRTEKGKFTDFSDYLNKIDIAACNKKVT
ESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGTDTATDAVFSVKI
PDEEWDDKHKLALEREMLGLYVSGHPLNGVAHLLATQVDTAIPAILDGDIPNDAPVKVGG
ILASVSRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSTYGAEIVDDAVVLVNARVKISD
DRICLIANELVVPDFSSVQPDRPLAVSLPTRQCTIDKVTALKQVLVRHPGTSQVHLRLVS
GERVTTLELDASLRVTPSPALMGDLKALLGPGCLGG
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgactggctccttcgtgcacctgcataaccacaccgagtactcgatgctggacggtgct
gcgaagatcagcccgatgctggccgaggcgcagcgcctggagatgtcggccatcgggatg
accgaccacggaaacatgttcggcgccagcgaattctacaacgcctgcaccggcgccggg
atcaagccgatcatcggggtcgaggcctacgtcgcccccggctcccggttcgactcccgc
cgtattttgtggggcgatccggcgcagaagagcgacgacgtgtcgggtagcggctcctac
acccacctgaccatggtcgccgagaatgccaccgggttgcgcaacctgttcaagctgacc
tcgctggcgtccttcgagggccaattgggcaagtggtcgcggatggacgccgagctgatc
gcggagcacgcgagcgggatcatcgcgaccaccggctgcccctccggcgaagtgcagacc
cggcttcggctcggccaggatcgtgaggcgctcgagtcggccgccaggtggcgggagatc
ttcggcgccgacaactacttcctggagctgatggaccacggcctatccatcgagcgccgg
gtccgcgacgggctgctggagatcggccgcaagctcggtatcgcgccgctggccaccaac
gactgccactacgtcactcgcgacgccgcccacaaccacgaggcgctgctctgcgtgcag
acgggcaagaccctgtcggacccgacccggttcaagttcgaaggcgacggctactacctg
aagtcggccgccgagatgcgcgcgatctgggacgccgaagtacccggcgcctgtgacatc
acgctgctgatcgccgaacgggtgggctcctacgccgaggtgtggacaccgcgcaaccgg
atgccggtgttcccggtgcccgacgggcacgatcaagcgtcgtggttgcggcacgaggtc
gaggccgggctggcccggcggttcccagacgggataccgacggggtatggcgagcgtgcc
gcctacgagatcgaggtcatctgtgccaagggttttccgtcgtacttcttgatcgtggcg
gacctggtcaactatgcgcggtcggtgaacatccgggtcggccctggacggggatcggcg
gccgggtcgctggtcgcgtacgcgttgggcatcaccgacatcgacccgatcccgcacggg
ctgctgtttgagcggttcctcaaccccgaacgcacgtcgatgcccgacatcgacatcgac
ttcgacgaccgccgccgcggcgagatggtgcgctacgccgccgacaagtggggccaggac
cgggtcgcgcaggtcatcaccttcggcaccatcaaaacgaaagcggcgcttaaggattcg
gcgcgcatccattacggccagcccggctttgcgatcgcggaccggatcaccaaggcgctg
ccgccgccgatcatggccaaagacatcccgctgtccgggatcaccgaccccaaccatgag
cggtacaaggaggccgccgaggtgcgcggcctgatcgacaccgatccggacgtgcgcacc
atctacgagaccgcccgcggcctggaagggctgattcgcaacgccggcgtgcacgcctgc
gcggtgatcatgagcagcgaaccgctcaccgacgcgatcccgctgtggaagcggccgcaa
gacggcgccatcatcaccggctgggactacccggcgtgcgaggaaatcggtctgctgaag
atggacttcctcggactgcgcaacctgacgattatcggcgatgcgatcgagaacatcaag
gccaacaggggaatcgacgtcgacctggagtccgtgccgctcgacgaccccgccacctac
gaattgctgggccgcggtgacactctcggcgtgttccagctcgacggcggtcccatgcgc
gacctcctgcggcgcatgcagcccaccgaattcgaagacgtcgtcgcggtgatcgcgctg
taccgacccgggccgatgggcatgaacgcccacaacgagtacgccgaccgcaagaacggc
cgccagcctatcaagccgatccaccccgaactcgccgagccgctgcaggcgatcctggcc
gagacctacggcttgatcgtctatcaagagcagatcatgcggattgcgcagaaggttgcc
ggctactcgctggcccgagccgacattctgcgaaaagccatgggtaagaagaaacgagaa
gtcctcgccaaggagtacgagggcttctcggccggaatgaagtccaacggattctccgac
ggagccgtcaaggcactgtgggacaccatcttgccgttcgccgactacgcgttcaacaag
tcgcacgcggccgggtatgcgatggtgtcctactggaccgcgtatctgaaggccaactac
cccgccgaatacatggccgggctgctcacctcggtcggcgacgacaaggacaaggccgcg
gtgtatctggccgactgccgcaaactcgggatcaccgtgctaccgcccgacgtcaacgaa
tccgggctgaacttcgcctcggtcggcaccgacatccgctacgggctcggcgcggttcgc
aacgttggcgcgaatgtcgttgcgtcgctgctcaagacccgcaccgaaaaaggcaagttc
accgacttctccgactacctgaacaagatcgacatcgcggcctgcaacaagaaggtcacc
gagtcgctgatcaaagctggcgcgttcgactcgctgggccacccccgcaagggcctgttc
ctggtgcacaccgacgccgtcgactcggtgctcggcaccaaaaaggccgaggcgatgggc
cagttcgacctgttcggcggcacagacaccgccaccgatgcggtgttctcggtcaagatt
cccgacgaagagtgggacgacaagcacaagctggcgttggagcgcgaaatgctggggctg
tatgtctcggggcacccgctcaacggtgtggcgcatctgctggccacccaggttgacacc
gccatcccggcgattctcgacggcgacatccccaacgacgccccagtgaaggtgggcggc
attctcgcgtcggtgagccggcgagtgaacaagaacgggatgccttgggcctcagcacaa
ttggaagacctcaccggcggcatcgaggtgatgttcttcccgcacacctactctacctac
ggcgccgagatcgtcgacgacgccgtggtgctggtcaacgcgcgggtaaagatttccgat
gatcgtatctgtttgatcgccaatgaacttgtggtcccggacttttcgagtgtgcagccg
gaccggccgctggcggtcagcttgcccacccgccagtgcaccattgacaaggtgactgcg
ctcaagcaggtgctggtccgccaccccggcacctcgcaggtgcatctacgcctggtcagc
ggagagcgggtcaccaccttggagctggatgcctcgctgcgggtgacgccgtcgccggcc
ttgatgggcgacctcaaggcgctgctgggcccaggctgtttgggcggttag
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