Maricurvus nonylphenolicus: R50073_11180
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Entry
R50073_11180 CDS
T10757
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
mny Maricurvus nonylphenolicus
Pathway
mny03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mny00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R50073_11180 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mny03019
]
R50073_11180 (rhlB)
Enzymes [BR:
mny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
R50073_11180 (rhlB)
Messenger RNA biogenesis [BR:
mny03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
R50073_11180 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BFM14935
LinkDB
All DBs
Position
1341741..1343294
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AA seq
517 aa
AA seq
DB search
MIGNLFRKLSGQSSDKPAAKKSANNRQDHRGDKTGKKPKKGQAAKGEKGQSDKQDASSSN
PRNQNKRRNNRRRSNKPAAKPWDISQYAVPEEEGKTRFHDLDLPLDVMHAISDLGYQYAS
PIQAQSLPHTLNGHDVLGKGQTGTGKTAAFLLTIIDDLLRHPIEGERYAGEARALVIAPT
RELVMQIADDAKNLTKYTDLKVHTLVGGMDYGKQQQRLNNELVDILVATPGRLLDFCGNQ
DVYLDQVEILVLDEADRMLDMGFIPQVRRIVRQTPKKSHRQTLFFSATFTDEVMNLADQW
TDQAIKIEIEPESVATDRVDQRVYLAATEEKYSLLYNILQQEDVESLIVFANRRDECRRL
HEKLERHDFKAGLLSGEIAQNKRVKTLEGFKSGALKVLVATDVAGRGIHIDGISHVVNFT
LPEEPEDYVHRIGRTGRAGRTGTSISFACEDDAFRLEPIQELLGQKLKCEMPPEHLLIDT
PPLGPRKDTGDRGERRGGGGGRGRGDGRGRGGPRRRS
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
ttgataggtaatctgtttcgcaagctgagtggccaatcttccgacaagcccgcagccaaa
aaatctgccaacaaccgccaggatcaccgcggtgataaaaccggcaaaaagcccaagaag
ggccaggccgcgaaaggtgaaaaagggcagtcagataagcaagacgcgtcttcttctaac
cctcgtaaccagaataaacgtcgtaataaccgccgtcgtagcaataagcctgcagccaag
ccatgggatatttcccagtatgcggtgcctgaggaagagggcaaaacccgcttccacgat
ctggatctgccactggatgtgatgcacgctatctctgatctgggttatcaatacgcttcg
cctattcaggcccaatcactgccgcataccctcaatggtcacgatgtgctgggtaaaggc
caaaccggtaccggtaaaacagcagcgttcctgctgactattattgatgatttgctgcgt
caccctattgaaggtgagcgttatgcgggtgaggcccgtgctctggtgattgcgccaacc
cgtgagttggtgatgcagattgctgatgatgctaaaaatctgaccaagtatacggatttg
aaggtacacaccctggtgggtggtatggattacggtaaacagcagcagcgattgaacaat
gagctggtggatattctggtggcaacgccggggcgtctgttggacttctgtggcaatcag
gatgtttatctggatcaggtggagattctggtgctcgatgaagccgaccgtatgctggat
atgggctttattccgcaggtgcgtcgtattgtgcgtcaaaccccgaaaaagtcccaccgc
caaaccctgttcttctccgccactttcaccgatgaggtgatgaaccttgccgatcagtgg
acggatcaggctatcaagattgagattgaacctgagagtgtggcgactgaccgggttgat
cagcgcgtttatctggctgccaccgaagagaaatacagtttgctctacaacatcctgcag
caggaagatgtggaaagtctgatcgtgtttgccaaccgtcgtgatgaatgccgccgtttg
catgaaaagctcgaacgccacgactttaaagctggcttgttatccggtgaaattgcccag
aataagcgggtgaaaaccctggaaggctttaagagcggtgctttgaaagtgttggtagct
accgatgtggcgggtcgtggtattcatattgatggcatcagccatgtggtgaactttacc
ttgccggaagagccggaagactacgtacaccgtattggccgtactggtcgagcgggccgt
accggtacctcaatcagcttcgcttgcgaagatgatgctttccgcctggagcctattcag
gagctgctgggtcaaaaactcaaatgtgagatgccaccagagcacctgttgattgatacg
ccgcctttggggccgcgcaaagacaccggtgaccgcggcgagcgccgtggtggcggtggc
ggacgtggccgtggagatggccgcggacgtggcggtcctcgtcgtcgctcataa
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