Maricurvus nonylphenolicus: R50073_14130
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Entry
R50073_14130 CDS
T10757
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mny Maricurvus nonylphenolicus
Brite
Enzymes [BR:
mny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
R50073_14130 (hrpA)
Messenger RNA biogenesis [BR:
mny03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
R50073_14130 (hrpA)
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GFIT
Other DBs
NCBI-ProteinID:
BFM15230
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Position
1665628..1669584
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AA seq
1318 aa
AA seq
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MSTDPSIDKVTLNAELTALESSLQEVMMRDAYRLGRQYRELHKRFSSGKPIDQGLGKLRK
AIEKSSALVEQRLKAIPKVAFPENLPISAKREAIAELIDKHQVVVLAGETGSGKTTQLPK
ICLDLGRGIKGLIGHTQPRRIAARTVASRIAEELETPLGESVGYQVRFTDHSTPTSHIKL
MTDGILLAEIQNDRYLNKYDTLIIDEAHERSLNIDFLLGYIKQILPKRPDLKVIITSATI
DLERFSKHFDDAPIIEVSGRTYPVDVLYRPMADSAEDLNSAIIGAIEEIEQLERLNHQRN
GEQRRGGDILIFMSGEREIREAALAIRRADFKHLDVLPLYARLSLAEQNKVFQSHKGRRV
VLATNVAETSITVPGIRYVIDPGTARISRYSYRTKVQRLPIESISQASANQRKGRCGRVS
EGVCIRLYDEQDFINRSEFTDAEILRTNLAAVILQMLNLRIGDIHDFPFVDPPDQRLIND
GFKLLQELQAVNKKGELTKTGRLLMKLPIDPRLGRMLVAAKQGQCVSELLIILSALSVQD
PRERPADKQQAADEKHRRFYDDHSDFMAYINLWHYVEEQRQELSQNQFRKQCKREFLSYL
RLREWRDIHHQLRLAAKDLELTENKQPAGYEAVHRALVTGLLGQVGFKAEEREYLGARNR
RFEIFPGSSQKKKRPKWLVSAQLLETSKLFAHTVAKIEPEWIQQAAQHLVKRRYFEPHYN
AKSGQVMAYESISLYGLVLVEKKRVSYSQINPEVSREVFIREALVEGLYRGKGKFYQHNE
QLIEELDVLEAKSRRRDILADDEVLFGFYNERVPQEIVNLAGFEHWRKEAESSQPKLLYI
DRETLMRHDASAVTEAQFPDELQCDGMRFPLVYHFEPGHPDDGVSLQSPVAALHLLPENR
LQWLVPGILREKCIAMVKALPKQWRKNFVPVPEYVDKALASMSADNTPLHEALAFQLKRH
TSIEIPADTWDLSALDNYYRMNIQVVDERGKIIDRDRDLTTLRDRYRDQLQQTLQSDDDG
LERDGITSWELPELPDHNLVESIPLSRAGMTISAYPALIDCGDSVSLKLLDNPVDAEFDS
RQGITRLLLLGLGQTLKSLRKELLKGKDIGLTVVSLGKRDQVVDQILLAAIHHCALAEQP
LVRTKVEFEHRLNTAKSTVTGYACELEKLLVDSLTQVVAIKKTIKSSKNALAIALAATDI
NCQLEQLFYPGFLYATSMQWLRQYPRYLKAITLRLDKVASQIQKDKIWMTELDEFWLKWE
QNLEKQGPALVASNPELQQFRWMLEEYRVSLFAQSLKTLMPVSAKRLNKQWQLAMGQL
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgtccacagatccctccatagacaaagtgaccctcaacgctgagctgaccgcgctggaa
tcctcgctgcaggaggtgatgatgcgtgatgcctatcggttgggacgccagtatcgggag
ctccataaacgcttcagctctggtaagccgattgatcagggattgggcaagctgcgcaaa
gccatcgagaagtcctctgccctggtagagcagcgcctcaaggccatacccaaggtggcc
tttcccgagaatctgcccatttcggccaagcgtgaggccattgctgagctgattgataag
catcaggtggttgtattggccggtgaaacgggctcgggtaaaaccacccagctgccaaaa
atctgcttggacttgggccgcggtattaaaggtttgattggtcatacccaaccgcggcgt
attgccgcccgtaccgtggccagccgtattgctgaggagctggaaacgcctttaggggag
tcggtgggctaccaggtacgatttaccgatcacagcacgcccaccagccatatcaagttg
atgaccgacggtatcctgctggcggagattcagaatgatcgttacctcaataaatacgac
accctgattattgatgaggcccacgagcgcagcctcaatattgattttttgttggggtat
atcaaacagattttgcccaaacgcccggatcttaaagtcattattacctcggcaaccatt
gatctggagcgtttctccaaacactttgatgatgcacccattattgaagtatccggtcgc
acctatccagtggatgtactctatcgccccatggcagatagcgctgaggatctcaatagc
gccatcattggcgcgattgaagaaatcgagcagcttgagcgccttaatcaccaacgtaac
ggtgagcagcgccgcggtggcgatattctgatatttatgagcggtgagcgggagattcgc
gaagcggccctggcgattcgccgtgccgactttaaacatctcgacgtgttgccgttatat
gctcgcctgagcctggctgaacaaaataaagtctttcagtcccataagggccgccgggtt
gtactggctaccaatgtggccgaaacttcgattacggtgccgggcattcgctatgtgatt
gacccgggcacggcgcgtatcagtcgttacagttatcgcaccaaggtgcagcgcttaccc
attgagtcaatcagccaggccagcgccaaccagcgtaaaggccgctgtggtcgggtcagt
gaaggcgtatgtattcgtctctacgatgaacaggactttatcaatcgctctgagtttacc
gatgctgaaattctgcgcactaacttggcggcggtgattttgcagatgctgaatttgcgc
atcggcgacattcacgattttccctttgttgatcctcccgatcagcgtttgattaacgac
ggttttaaactgctgcaggaactgcaggcggtcaataaaaaaggtgagctgaccaaaacc
ggccgcctgttaatgaagctgccgattgatccacgcttgggccgtatgttggtggctgcc
aagcaggggcagtgtgttagtgaattgttgattattctcagtgccctgtcggtacaggat
ccccgtgagcgtccggccgacaagcagcaagccgccgatgaaaaacaccgccgcttttat
gacgaccactcagattttatggcttacatcaatctgtggcattacgtcgaagagcagcgc
caggagttatcgcaaaatcaattccgcaaacagtgcaagcgcgagttcttatcctattta
cgtttacgggaatggcgagatatccaccatcaactgcgcctggcggccaaggatctcgag
ttaaccgaaaataaacagcctgccggttacgaggctgtacacagggccttggtgacagga
ttgcttggacaggtaggttttaaagccgaagagcgcgaatatttaggtgctcgcaaccgc
cgctttgaaatcttccctggttcatcacaaaagaaaaaacgccccaagtggctggtgtct
gcacagttgctggaaaccagcaaactgtttgcccatacggtggccaaaatcgagcctgaa
tggatacagcaggcagctcagcacctggtgaagcggcgttactttgaaccccattacaat
gccaaaagcggccaggtgatggcctatgaaagtatcagtctctatggcctggtgctggtt
gagaaaaaacgcgttagttattcacagatcaatccggaagtatctcgtgaagtatttatt
cgcgaggcactggtggaaggtttgtatcgtggtaaaggtaagttctatcaacataacgag
cagttgattgaagaactggatgtgctggaagccaaatcccgtagacgggatattctggcc
gatgacgaagtgctgtttggtttttataacgagcgagtaccacaggaaattgtcaatctg
gcgggctttgagcattggcgcaaagaagctgagagctcgcaaccgaagctactgtatatc
gaccgcgaaaccctgatgcgccacgatgccagtgccgtgaccgaagcgcagttccccgat
gaattgcagtgtgatggtatgcgtttcccactggtctatcactttgagccaggacatccc
gatgatggcgtaagcttgcagtcccctgtcgcggctttgcatttattaccggaaaatcgt
ctgcaatggttggtgccgggcatcttgcgtgaaaaatgtatcgcgatggtcaaagcgcta
cccaaacagtggcgtaaaaactttgtgccggtgcctgagtatgtcgataaagccctggct
tccatgtcggctgataatacgccgctgcacgaagctttggcttttcagttaaagcgtcat
acttctattgagattccggccgatacctgggatttgtcggcgctggacaactactaccgt
atgaatattcaggtagtagatgagcgcggcaaaattatcgatcgcgatcgagatttaacc
acccttagagatcgctatcgagaccaattgcagcaaactctgcagagtgacgatgacggg
ctggaacgtgacggcattacaagctgggagctaccagagttgccagaccacaatttggtt
gaatccatcccgttaagccgcgcaggtatgacgattagtgcttatccggcgttgattgat
tgtggtgatagcgtctcgttaaaactgctcgataaccctgttgatgctgagtttgatagt
cgtcagggcattacccgcttgttgctgctggggctgggacagacgcttaaatcgttgcgc
aaggagctgttaaaaggcaaagatattggccttaccgtagtcagtttaggcaagcgtgat
caggtggtggatcagatcttactggctgctattcaccattgcgcattagctgagcagccc
ttggtaagaaccaaagttgagtttgagcatcggctcaatacggctaaatccactgtaacc
ggctatgcctgcgaactggaaaaactcctggtcgatagcctgacccaggtggtggctatc
aagaaaaccattaaatccagtaaaaatgccctggctattgccctggctgctacggatatt
aactgtcagttggagcaactgttttatcctggcttcctctacgccacctctatgcaatgg
ttgcggcagtaccccaggtatttaaaagccatcaccttgcgcctggacaaggttgccagc
caaatccagaaagacaaaatctggatgaccgagctggatgagttctggctcaaatgggaa
cagaacctggagaagcaggggcctgccttggtagccagcaatcctgagttacaacaattt
cgctggatgctggaagagtatcgggtctctttatttgcccaaagtctgaaaacattgatg
ccggtatcagccaagcgcctgaataagcagtggcagttggcgatggggcagttgtaa
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