Maricurvus nonylphenolicus: R50073_21780
Help
Entry
R50073_21780 CDS
T10757
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mny Maricurvus nonylphenolicus
Pathway
mny03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mny00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R50073_21780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mny03019
]
R50073_21780
Enzymes [BR:
mny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
R50073_21780
Messenger RNA biogenesis [BR:
mny03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
R50073_21780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
DUF8086
HI1480
Motif
Other DBs
NCBI-ProteinID:
BFM15995
LinkDB
All DBs
Position
2543623..2545086
Genome browser
AA seq
487 aa
AA seq
DB search
MSFASLGLSTEIVDAVAEQGYETPSPIQAQAIPAVIEGRDVMAAAQTGTGKTAGFTLPLL
ERLSGGEKVQANQVRALVLTPTRELAAQVGESVETYGKNLPLRSTVVFGGVKINPQMLRL
RRGVDVLVATPGRLLDLYNQNAVKFKQLEILVLDEADRMLDMGFIHDIRRILKLLPAKRQ
NLLFSATFSEEIRNLAKGLVHNPVEVSVAPANSTAERVEQIIHPVDKGRKPALLTQLIHD
NNWQQVLVFCRTKHGCNRLVKTLIGNKIESAAIHGNKSQGARTKALADFKSGAIRVLVAT
DIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGHAVSLVCADEAKQLQAIER
LIGKLIDRDILDGFQPVNPLAQTRLDNKPKKPKKPKKPKTEHQDGQRSGDAARGHKPTGK
NKKHVAGKGQGKPGANSKADKSQSSKAQPSKNKGSKPKPASGNAKAAAGATAQPRKRPRK
RPVKPSA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgcctctcttggtctaagtaccgaaatagttgatgccgttgccgaacaaggc
tacgaaaccccatctccaatccaggcgcaggcgatccccgcagtgatagaggggcgtgat
gtaatggctgcggctcaaaccggcacgggtaagaccgccggctttaccttgccgttgctg
gagcgcttgtcgggcggtgagaaagtgcaggccaatcaggtacgtgcactggtattgacg
cctactcgtgaactggcagcgcaggttggcgagagtgttgagacctatggtaagaatctt
ccattgcgctctacggtggtatttggcggggttaaaatcaatccgcagatgttgcgtttg
cgtcgtggcgttgatgtcttggtggctacgcctggtcgtttgctggatctctataaccaa
aatgcggtgaagtttaagcagctggaaatcctggtgctggatgaagctgatcgtatgctg
gatatgggttttattcacgatatccgtcgcatactgaagctgttacctgctaagcgtcaa
aacctgctgttctcggctaccttctctgaagagattcgcaatctggcgaaagggctggta
cacaaccctgtagaagtctcagtcgctcctgccaacagtacggctgagcgggttgaacag
attattcaccccgtcgataaagggcgcaaaccggcgttactgacgcagctaattcacgac
aataattggcagcaggtattggtattttgtcgaaccaagcacggatgtaatcgtctggtt
aaaaccctgattggtaataaaattgagtccgcggcaattcacggcaataaaagccagggt
gccagaaccaaagcgctggcggactttaaaagcggtgctatcagagtactggtagcaacc
gatattgcagcacggggcttggatattgatcagttgcctcaagtggtaaatttcgacttg
ccgaatgtgccagaagactatgttcatcgcattggacgtaccggtcgtgcaggtgccagt
ggacatgcggtatctttggtgtgtgccgatgaggccaagcagctacaagccattgagcga
ttaattggcaagttgattgaccgagacattctggatggcttccagccggttaatccattg
gcgcagacccgtttggataataaacccaagaaaccgaaaaagccgaagaagccaaaaacg
gagcatcaggatggtcagcgctctggagatgcggcgcgtggccataagcccacgggtaaa
aacaaaaaacatgtagcaggtaaggggcagggtaagcctggcgctaatagcaaggcggat
aagtcacagtcatctaaggcccagccttctaagaataagggctctaaacccaagcctgct
tccggaaatgccaaagcggcagccggagctacagcgcaaccccgtaagcgtccgcgcaaa
agacccgttaaaccttctgcctaa
DBGET
integrated database retrieval system
