Maricurvus nonylphenolicus: R50073_40660
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Entry
R50073_40660 CDS
T10757
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
mny Maricurvus nonylphenolicus
Pathway
mny02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mny00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
R50073_40660 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mny03021
]
R50073_40660 (rpoD)
Transcription machinery [BR:
mny03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
R50073_40660 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
BFM17883
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Position
4686664..4688484
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AA seq
606 aa
AA seq
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MSEQAQEQSRIKELIARGKEQGYLTYAEVNDHLPEDISDPDQVEDIIQMINDLGIKVYEN
APDAEEILMADGDSSADEIAAAEAAAALAAVETEAGRTTDPVRMYMREMGTVELLTREGE
IAIAKRIEEGTRELMHAIAYWPGAVEKLLNEYDLIEQEERRLPDVIAGWLDPADEVPSAL
AQAQAAQEAGDSDDDDDDDENAGGVDPEEAKERFEELRAQWKKAEAALEKHGRDSKEGGK
ALEELGEVFKYFKLPPRQFDPQYGSIRGILESIRKEERNIMQLCVRKAKMPRKTFIKEFP
GNEINEDWIPEIVKKKRDYSDTIKAVAGDIMRSQRKLQQFEDMTGLELAAIKEINRRMSI
GEARARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKF
STYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRVSRQMLQEMGREPTPEELGERM
DMPEDKVRKVLKIAKEPISMETPIGDDEDSHLGDFIEDSTIVSPVESATSEGLEEATKDV
LSGLTAREAKVLRMRFGINMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSDHL
RSFLDE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaagcccaagagcaatctcgtattaaagagctgatcgcccgtggtaaagag
cagggttaccttacctatgctgaagtaaacgaccacttacccgaagacatttctgatccg
gatcaggtcgaagatatcatccagatgatcaatgacctgggtatcaaggtgtacgaaaac
gcaccggatgccgaagagatcctgatggctgacggtgactcctccgccgatgagatcgcc
gctgctgaagccgctgctgccctggccgccgtagaaaccgaagccggtcgcaccactgac
ccagtgcgtatgtatatgcgcgaaatgggtaccgtagagctgctgacccgcgaaggcgaa
atcgccattgccaagcgtatcgaagaaggtacccgtgagctgatgcacgccatcgcctac
tggcctggcgcggttgaaaagctgctgaacgaatacgacctgattgaacaggaagaacgt
cgcctgccagacgttatcgctggttggctagaccctgccgacgaagtcccctccgccctg
gctcaagcccaagcggctcaggaagctggcgacagtgatgatgacgatgatgacgacgaa
aatgccggtggcgtagatccagaagaagccaaagagcgcttcgaagagctgcgcgcccag
tggaaaaaagctgaagccgctctggaaaaacacggccgtgacagcaaagaaggcggcaaa
gccctggaagagctgggtgaagtcttcaaatacttcaaactgccaccacgtcagttcgac
ccgcagtacggttccatccgtggcattctggaaagcatccgtaaagaagagcgcaacatc
atgcagctttgtgtacgcaaagccaaaatgccgcgcaagacctttatcaaagagttccca
ggtaacgagattaacgaagactggatcccggaaatcgttaagaagaagcgcgactactcc
gacaccatcaaagcggtggccggcgacatcatgcgctcccagcgcaagctgcaacaattt
gaagacatgactggcctggagctggcggcgatcaaagagatcaaccgtcgcatgtccatc
ggtgaagcccgtgctcgccgcgccaagaaagaaatggttgaagccaacctgcgtctggtt
atctcgattgccaaaaagtacaccaaccgtggcctgcagttcctcgacctgattcaggaa
ggtaacatcggtctgatgaaggcggtggataagtttgaataccgtcgcggttacaagttc
tcgacctacgccacctggtggattcgtcaggcgattacccgttctattgccgaccaggca
cgtaccatccgtattccggtacacatgattgagaccatcaacaagctcaaccgtgttagc
cgccagatgctgcaggaaatgggccgcgagccaacgcctgaagaactgggcgagcgtatg
gacatgccggaagacaaggttcgcaaagtcctgaagattgccaaagagccaatctccatg
gaaacccccatcggtgacgacgaagattcacatctgggcgactttatcgaagactccacc
atcgtatccccagtggaatctgcgacctccgaaggcctggaagaagccaccaaagacgta
ctgtctggcctgaccgcccgtgaagccaaggtactgcgtatgcgcttcggtattaatatg
aataccgaccacaccctggaagaagtaggcaagcagttcgacgtaacccgtgaacgtatc
cgtcagatcgaagccaaggccctgcgcaaactgcgtcacccttcccgctccgatcacctg
cgtagcttcctggacgagtaa
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