Maricurvus nonylphenolicus: R50073_42270
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Entry
R50073_42270 CDS
T10757
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mny Maricurvus nonylphenolicus
Pathway
mny03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mny00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R50073_42270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mny03019
]
R50073_42270
03009 Ribosome biogenesis [BR:
mny03009
]
R50073_42270
Enzymes [BR:
mny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
R50073_42270
Messenger RNA biogenesis [BR:
mny03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
R50073_42270
Ribosome biogenesis [BR:
mny03009
]
Prokaryotic type
rRNA helicases
R50073_42270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
AAA_30
CMS1
CobA_CobO_BtuR
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
BFM18044
LinkDB
All DBs
Position
4881382..4883205
Genome browser
AA seq
607 aa
AA seq
DB search
MSNDSLRFADLGLADAVLSATEAVGYETPSPIQAASIPHLLEGKDILGMAQTGTGKTAAF
ALPLLSRIDCKLKKPQVLVLAPTRELAIQVSEAFQTYAAKLKGFHVLPIYGGSDYRGQLR
GLDRGPQVVVGTPGRVMDHLKRGTLKLDNLQSVVLDEADEMLRMGFIDDVTWILDQTPDE
VQVALFSATMPREIRKVADSYLTDPEVVQIKAATQTVERIEQKYWLARGTHKLEALTRIL
EVENFDAIIMFVRTKTATAELAEKLEARGYAAAALNGDMSQQLRERAIERLKNGKLDIII
ATDVAARGIDVARVSHVINYDIPYDTEAYVHRIGRTGRAGRTGTAILFVEPREKRMLYSI
ERATRQTIPRMDLPSREEVADKRVTQFKEQINEVMGNQDLAFYRELVMSFSQESDADPID
ITAALAFMAQKERPLVLPPEEQRPRKERKDRKDRDDSRNDSRNNRGERGERPRRKDREDD
GIERESFRIEVGYNHGVKPGDIVGAIANEADIDSSYIGSIQIGDDYSTVDLPKDMPAELM
QHMQKVRVRNQQIRMALASDDDKQEIIESRRNRPRNDKPRGRRGDGYKGGYKGKGFKGGP
KGRSSRS
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatgattccctgcgcttcgccgatctcggcctggcggacgctgttttatctgca
actgaagcagtgggttatgaaaccccctccccgattcaggcagccagtattcctcacttg
ctggaaggcaaagatatcctcggtatggcacaaaccggtacgggtaaaaccgctgccttt
gccctgccgctattaagtcgtatcgactgtaaactgaaaaaacctcaggttttggtgcta
gcgcctacccgcgagctggccatccaggtctctgaagcatttcagacctatgctgccaaa
ttgaaaggtttccacgtactgcctatttacggtggttctgattaccgtggtcagctgcgt
ggtttggaccgtggcccacaagtagttgtaggcaccccaggtcgcgtgatggatcacctc
aagcgcggcactttaaagctcgataacctgcaaagcgttgtgctggatgaagccgatgaa
atgctgcgtatgggctttattgatgatgtgacctggattctggatcaaactccagacgag
gttcaggtagcactcttctccgccaccatgccacgtgaaatccgcaaggttgccgacagt
tacctgaccgatcctgaagtggtgcaaattaaagctgccacccaaaccgttgagcgtatc
gagcagaagtactggctggcccgcggcacccacaaactggaagccctgacccgcattctg
gaagtggaaaacttcgatgcgatcattatgtttgtgcgcaccaagaccgccactgccgag
ctggctgaaaagcttgaagcccgcggatacgctgcggctgccctgaatggtgatatgagc
cagcagttacgtgagcgcgccattgagcgtctgaagaacggcaaactggatatcattatt
gctaccgacgttgccgcccgtggtattgatgtagcgcgcgttagccacgtcattaactac
gacatcccatatgacactgaagcttacgttcaccgtattggtcgtactggtcgtgcgggt
cgtaccggtactgcgattctgtttgttgagcctcgtgaaaaacgcatgctctacagcatc
gagcgtgctacgcgtcagactattcctcgtatggatctgccttctcgtgaagaagtggcc
gacaagcgtgttacccagttcaaagagcagatcaatgaagtcatgggtaatcaggatctg
gccttttaccgcgaattggtaatgagcttcagccaagagagcgatgccgatccaatcgac
attaccgctgccttggcctttatggcacagaaagaacgcccgctggtactgccgcctgaa
gagcagcgtccacgtaaagaacgcaaggaccgcaaagatcgcgatgactctcgtaacgac
tcacgcaacaacagaggcgagcgcggtgagcgtccacgccgtaaagatcgcgaagatgat
ggcattgaacgcgaaagcttccgtatcgaggttggctacaaccatggtgtgaaaccaggt
gatatcgtgggcgccattgccaacgaagccgatatcgacagcagctatattggcagcatt
cagattggcgacgactacagtactgtagacttgccaaaagatatgccagcagaactgatg
cagcatatgcagaaagtgcgcgtgcgcaatcagcagattcgtatggcgctggcgtctgat
gatgacaagcaggaaattatcgaaagccgtcgcaatcgccctcgcaacgataaacctcgt
ggtcgtcgcggtgatggttacaaaggtggttataaaggcaagggcttcaaaggtggcccg
aaaggccgctcttcccgcagctaa
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