KEGG   Maricurvus nonylphenolicus: R50073_44120
Entry
R50073_44120      CDS       T10757                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
mny  Maricurvus nonylphenolicus
Pathway
mny02024  Quorum sensing
mny03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mny00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    R50073_44120 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    R50073_44120 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mny03019]
    R50073_44120 (hfq)
   03036 Chromosome and associated proteins [BR:mny03036]
    R50073_44120 (hfq)
Messenger RNA biogenesis [BR:mny03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     R50073_44120 (hfq)
Chromosome and associated proteins [BR:mny03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    R50073_44120 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: BFM18229
LinkDB
Position
complement(5112070..5112330)
AA seq 86 aa
MSKGHSLQDPYLNVLRKERIPVSIYLVNGIKLQGQVESFDQFVVLLKNTVSQMVYKHAIS
TIVPSRAVRVPMLNPQAGQEGGEGEG
NT seq 261 nt   +upstreamnt  +downstreamnt
atgtcaaaagggcatagcttacaagacccttacttgaatgtgctgcgtaaagagcgcatt
cccgtttccatctacctggtaaacggtattaaattgcaggggcaagtagaatctttcgac
caatttgttgtactgctcaagaacactgtgagccagatggtctacaagcacgctatttcc
accatcgttccatcccgcgctgtgcgtgttcctatgctgaacccacaagctggccaggaa
ggtggcgaaggcgagggttaa

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