Macrobrachium nipponense (oriental river prawn): 135194940
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Entry
135194940 CDS
T09903
Name
(RefSeq) integrin beta-PS-like isoform X1
KO
K05719
integrin beta 1
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz04145
Phagosome
mnz04512
ECM-receptor interaction
mnz04820
Cytoskeleton in muscle cells
mnz05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
135194940
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135194940
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
135194940
09142 Cell motility
04820 Cytoskeleton in muscle cells
135194940
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
135194940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnz04131
]
135194940
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mnz04147
]
135194940
04515 Cell adhesion molecules [BR:
mnz04515
]
135194940
04090 CD molecules [BR:
mnz04090
]
135194940
Membrane trafficking [BR:
mnz04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
135194940
Exosome [BR:
mnz04147
]
Exosomal proteins
Proteins found in most exosomes
135194940
Cell adhesion molecules [BR:
mnz04515
]
Integrins
Integrin beta subunits
135194940
CD molecules [BR:
mnz04090
]
Proteins
135194940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
EGF_2
I-EGF_1
EGF_Teneurin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
135194940
NCBI-ProteinID:
XP_064077230
LinkDB
All DBs
Position
15:complement(54011492..54070064)
Genome browser
AA seq
831 aa
AA seq
DB search
MRESTNAENASTGPHCTWLARYMLVVNRYTMRLHCVAAGLILIVVLTSATSIPNCKYTDC
NSCIQASSCMWCMKANITDGTNRCISNLHSEAREWKESCGQENVIEYENFYDAVEDEDFS
DTTEHIIQMKPQKLKLQLRSGEPYNLTIKYRHVQNYPVDLYYLMDGSKSMSDDKDMLSGL
GNDLAEGIKNVTTNFRLGFGVFVDKMVLPYVSTAPFGKQPSCEVCNPPTLTPGIEQLCVP
CSPPYGFINSLPLTHNIAEFESKVKEAPIATNKDFPEGGFDALMQAMVCQKEIDWREQSA
RVIVLSTDAGFHYAGDGRLAGILTPNDMTCHLDNNGTYTRSRDLDYPSVSQINDMANQNG
ISLIFAITQDQEPLYVKLADHISGASSGILEQDSSNIVRLVTGKVEDIISTVKLEANVKG
PVKIKYFSKCNGEALMQRSSCKGLVPGNEIEFILEFKLEECPEKEEDFQQTIKIHLGGRQ
ETVDVDLTMACRCKCSEPGDKGYIEKAKQCSYHGTYKCGICDCDEGYKGVDCLCEDFADG
RNGTSEETCMGPDMSLICSNRGTCVCGVCQCDKGDSPEKKISGTYCECTNYQCPTTSGKL
CSGHGECVCNKCNCSEGWTGYNCGCEDSEDGCIEPGSKEICSDQGECKCNKCICNPGYSG
KYCGDCPNCSGKCVDYKPCVQCQAFQTGEYSPEVCQSNCTLFNVTKVPEIKADRDEQLCS
FFDDNECRFFFMYRRYDNGTIEVLVQENVECSTSVNMWGVIISVLCTVVLIGLVALLVWR
ITASIHDRREYQKFVLDQQNAKWSAGENPLYKKATTSVQNPLFGVNNEESR
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtccacgaatgcggagaacgcgagtacggggccccactgtacttggttggcc
agatacatgttagtagtcaatagatacaccatgagactgcactgtgttgctgcggggtta
attctgatagtagttttgacttctgctaccagcatccctaattgcaaatacacagattgt
aacagttgcatccaggcatcttcttgtatgtggtgcatgaaagctaacattactgatggt
acaaataggtgcattagcaatttacattctgaagccagggaatggaaggagagctgtgga
caagaaaacgtaatcgagtatgagaatttttatgatgctgtggaagatgaagatttctct
gataccactgaacacataattcaaatgaaaccacagaaactaaagttgcaacttagatct
ggggagccctacaacttaacaataaaatacagacatgtccagaactatcctgtggacctc
tattacttgatggatggatccaagtcaatgagtgatgataaggatatgctctctggatta
ggaaatgatcttgccgagggcatcaaaaatgttacgaccaatttccgtttaggttttggc
gtttttgttgataaaatggtcttgccctacgtatctacagcaccttttgggaagcagcca
tcttgtgaagtctgcaaccctccaaccctaactcctgggatagagcaattgtgtgttccc
tgcagtcctccgtatggattcataaattccttacctctaactcataacattgcagaattt
gaaagcaaagtgaaggaggcaccgatagctacgaacaaagacttccccgaaggtggtttt
gatgccctgatgcaagcaatggtctgtcagaaagagattgactggagggaacagtcagca
cgtgtcattgttctctctactgatgctggttttcattatgcaggagacggaaggcttgct
ggaattttaacacctaatgacatgacctgccaccttgataataatggtacctacactcgc
tcaagggatttggattatccttctgtttcgcagataaatgacatggcaaatcaaaatggc
attagtttaatttttgccataactcaggatcaggaacctctctatgttaaactagcagac
catatttctggggcctcttctggcattttagagcaggattcttctaatatagtgcgtctt
gttacgggaaaagttgaggatatcataagcactgttaaactggaagcaaatgtgaagggt
cctgtaaaaataaaatatttttcaaaatgtaatggtgaggccctgatgcagaggtcaagt
tgcaagggtcttgtccctggcaatgagatagaattcatcttagagtttaagctcgaagag
tgcccagaaaaagaggaagatttccagcaaacaatcaagattcacttaggtggacgacag
gaaacggttgatgttgacttgacaatggcctgcagatgtaagtgtagtgaacctggtgac
aagggttacattgagaaagcaaaacagtgttcttaccatggcacatacaagtgtggaatt
tgcgactgtgacgaagggtacaagggcgttgattgtttgtgtgaagacttcgctgatgga
agaaatggcacttctgaagagacttgcatggggccagatatgtcactgatttgcagcaac
aggggtacctgtgtctgtggagtatgtcagtgtgacaagggagattctccagaaaagaaa
atcagtgggacgtactgtgagtgcactaattaccagtgcccaacaacatcagggaagtta
tgttcaggtcacggagagtgcgtatgcaacaaatgcaattgttctgaaggatggacagga
tataactgtggctgtgaagatagtgaagatggttgtatagaaccagggtcaaaagaaata
tgctctgaccaaggggagtgtaagtgtaacaagtgcatctgtaacccaggctacagtggg
aaatactgtggcgactgtccgaattgttctgggaaatgtgttgattataaaccttgcgta
cagtgtcaagccttccagactggagagtattcccctgaggtttgccagagtaattgtact
ctcttcaacgttaccaaagtcccagaaataaaagctgaccgagacgaacaactttgttca
ttctttgatgataatgaatgcaggtttttcttcatgtatcgaagatatgataatggaaca
atcgaagtccttgttcaggaaaatgtggaatgctcaacatctgtgaatatgtggggcgtt
atcattagtgttctgtgtactgttgttctcatcggtctggttgcccttcttgtctggagg
atcacagctagcattcatgacagacgtgaataccagaaatttgttttggaccagcagaat
gctaaatggagtgctggtgagaaccctttgtacaagaaagccacaacatctgtgcagaat
cctttgtttggtgttaacaatgaagagtcaaggtaa
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