Macrobrachium nipponense (oriental river prawn): 135195060
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Entry
135195060 CDS
T09903
Name
(RefSeq) transportin-1-like isoform X1
KO
K18752
transportin-1
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135195060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135195060
03009 Ribosome biogenesis [BR:
mnz03009
]
135195060
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
135195060
Ribosome biogenesis [BR:
mnz03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
135195060
Pre-60S particles
135195060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TOR1L1_N
Cnd1
HEAT_2
TPR_IMB1
Arm
Vac14_Fab1_bd
HEAT_EF3_N
TPR_IPO5
IBN_N
HEAT_MROH2B_C
TPR_DNAAF5
HEAT_GCN1_C
MMS19_C
PDS5
Adaptin_N
TPR_TTI1_C
Ltn1_1st
HEAT_GCN1_C_2
SCD
VPS15-like_hel
UNC45-central
RTP1_C1
HEAT_MROH2B_1st
Proteasom_PSMB
Cnd3
Motif
Other DBs
NCBI-GeneID:
135195060
NCBI-ProteinID:
XP_064077485
LinkDB
All DBs
Position
15:74687014..74776177
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AA seq
894 aa
AA seq
DB search
MAGWNPNSDALTQILGLLRESQSPDTIVQQSVQQKLEELNKFTDFNKYLIYVLTKLTSED
EPTRSLSGLILKNNVKAHFQQFPPDVAQFIKAECLSAVGDPSPLIRATVGILITTTASKG
ELSTWPELLPRLCEMLDSADYNVCEGAFGALQKICEDSGEFLEKSPSRPLDTLIPKFLEF
FKHSSSKIRSHAIACVNQFIISKTQALMANIDTFLQNLFHLAMDDDPDVRKNVCRALVML
LDAHISSLIPHMHNIIEYMMIRTQDPDENVALEACEFWLSLAEHPICKEALKPHLPKLIP
ILVRGMKYSEIDIILLKGDVEEDESVPDRSEDIKPRFHKSRHTIRHEPMENGGSCGEEFQ
DDESDDGLDDDSSLSDWNLRKCSAAALDVLANVFREEMLPVILPILKETLFHQEWEIRES
GILALGAIAEGCMNGMTQHLPELIPYLINCLQDKKALVRSITCWTLSRYCHWAVILPDHT
YLKPLMYELLKCVLDSNKRVQEAACSAFATLEEEACTELVPYLADILKTLVFAFRKYQAK
NLLILYDAIGTLADSVGNYLNKDDYIQMLMPPLIEKWNVLKDEDKDLFPLLECLSSVATA
LQSGFLPYCGPVYQRCVSLVEQTLNQTMAHAQNPEQFEAADKDFMIVSLDLLSGLAEGLN
GHIGQLVQQSNIMQLLYQAMQDPMPEVRQSSFALLGDLTKACFQYVAPCISEFMPILGQN
LNPELISVCNNATWAIGEISVKLGAEMRVYINLVLNDLIFIINKPNTPKTLLENTAITIG
RLGYVCPNEVAPLLQQFIRQWCISLRNIRDNEEKDSAFRGVCNMISVNPGGVVEDFIFFC
DAIASWVNPKQDLKEMFHKILHCFKEQVGEENWKRFTEQFPPPLKERLSQHYGV
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggccggttggaatccgaacagtgacgccttaacgcaaattttaggtcttttacgcgag
tcacaatccccggacacaatagtgcaacaatctgtacagcagaaactagaagaactaaac
aagtttacggacttcaataaatatctcatatatgtgctcacaaaactaacttccgaagat
gaacctacaagatccctaagtgggctaattctgaaaaataacgtcaaggcccactttcaa
cagttccctccagatgtggcacaatttattaaggcagaatgtttgtcagcagtgggggat
ccatctccgctcattcgggccactgtgggcatactcatcaccactacagcgtcaaaggga
gagttatccacttggccagaactcctccctaggctatgtgagatgctcgactctgcagat
tataatgtctgtgagggagcatttggcgcgttgcagaaaatttgtgaggatagtggcgag
tttttagaaaaaagtcctagccgacctttggatactctcatcccaaaatttttagagttt
tttaaacattcatcctcaaaaattagatctcatgcaattgcttgcgttaaccagtttatt
atcagcaaaacacaggcattgatggccaacattgatacttttctacagaatttgttccac
ctggctatggacgatgacccggacgtacggaaaaatgtttgtcgagccttggttatgttg
cttgatgctcatatatcttccctcattccccacatgcacaacataatagaatatatgatg
attagaacgcaggaccctgatgaaaatgtagccctggaagcgtgcgagttttggttgtcg
ttagcagaacaccctatttgtaaggaagctctcaaaccacacctgccaaaattaataccc
attttagtgaggggcatgaaatattcagaaatagatattatattattgaagggtgacgtt
gaagaagacgaaagtgtacctgatcgaagtgaagatatcaagccacgtttccataaatca
agacatacaattcgtcatgaacccatggagaatggaggaagttgtggtgaagaattccaa
gatgatgaatcagatgatgggctagatgacgactcttcgttgtctgactggaacttgaga
aagtgctcagcagctgcgctagatgtattggcaaatgtcttcagagaagaaatgttaccc
gttatccttccaatcctaaaagaaaccctgtttcaccaagaatgggaaattagagagagc
ggtattctagcacttggagcaattgcggagggttgcatgaatggaatgacccagcaccta
ccggaacttattccttacttgataaactgtcttcaggataaaaaggctttggtccgatcc
ataacttgctggaccctttcacgttattgtcattgggctgtcattcttccagatcacacc
tacctcaaacctcttatgtatgagcttctaaagtgcgtgctagatagtaacaagagagtt
caagaagctgcctgctctgcctttgccacacttgaagaagaggcatgcacagagttggta
ccttatcttgctgatattttaaagaccttggtgtttgcattcagaaagtatcaggcaaaa
aatttgttaatactatatgatgcaattggtactcttgctgattctgttgggaactaccta
aacaaagatgactacattcaaatgctcatgcccccattgatagaaaagtggaatgttttg
aaggatgaagacaaagacctttttcctctgttagaatgtttatcaagtgtggccacagct
ctacagtcgggattcttgccatattgtgggccagtatatcagcgatgtgtatcattggtg
gagcagactctaaatcagacaatggctcatgcgcaaaatcctgaacagtttgaagcagcg
gataaggactttatgattgtgtcgttagatttactgtcgggtttagcggagggtttgaat
ggacacataggacagctggtgcagcaatccaatataatgcaacttctttatcaagctatg
caggaccccatgcccgaggttagacaaagttcttttgctcttctgggtgatctgacgaaa
gcatgtttccagtatgtggccccttgtatatctgagttcatgcccattcttggtcaaaat
ctaaatccagaattgatttctgtgtgcaataatgcaacgtgggccatcggtgagatttca
gttaaacttggcgcagagatgcgtgtttacatcaacttggtcttgaatgacttaatattc
atcataaataaaccaaacacaccaaagacgcttttagaaaatacggccattactattgga
cggctaggctatgtctgcccaaatgaagtggcccccctgttgcaacagtttatcaggcag
tggtgtatatcgctgcgtaatatccgagataatgaagagaaggactcagcattccgtggg
gtatgcaatatgatcagtgtcaacccaggcggagttgtggaagacttcatttttttctgt
gatgcaatagcatcatgggtgaatccaaagcaggatttgaaagagatgttccataaaatc
ttgcactgcttcaaggaacaagttggcgaagagaactggaaacgcttcacagaacagttc
ccaccgccattgaaggaacgtctttcccagcattatggcgtttga
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