Macrobrachium nipponense (oriental river prawn): 135196322
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Entry
135196322 CDS
T09903
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135196322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135196322
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135196322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
135196322
NCBI-ProteinID:
XP_064079142
LinkDB
All DBs
Position
23:complement(19704080..19733948)
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AA seq
287 aa
AA seq
DB search
MTSMEIWKLFEPDNYYKSFLEQNKRPDGRGLKEVRPITINVGTVNTADGSATVRIGHTSV
LCVAIKAELATPMLRKPNEGYIIPNVELYPCCSPKFKAGPPGEKAIEASQFLKNVIKSAN
LVDLEAFCIKPNKMAWCLYCDVVCVNYDGNLLDAALISFIAALQNVKLPEIRYDDETERV
EVGLERNVPVALLRKPVSSTFTYNNENIPCNLLFFQLMDPTSEDEDQGRGEITIVLLEDG
TMCTINKSGGQLLTQETLDNFVTLGKAQIKIVNDCIAKALIERMDES
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccatggaaatttggaaattgttcgaaccagataattattacaagagcttttta
gagcaaaacaagaggccagatggacgaggcttaaaggaagttcgaccaattacaattaat
gttggaacagtgaatacagcagatggttcggctactgtgcgcattggtcataccagcgtg
ttatgtgtggccattaaagcagaattagcaactccaatgcttagaaaaccaaatgaaggt
tacatcattcccaatgtagaactgtatccatgttgttcgccaaaatttaaggctgggcct
cccggtgagaaagcgatagaagcaagtcagtttcttaagaatgtcattaaaagtgcaaat
ttagtggatttagaagcgttttgtatcaaacctaacaagatggcctggtgtctttattgt
gatgttgtatgcgtgaattatgatggaaacctgttagatgctgctctgatatcctttatt
gctgcacttcaaaatgtaaagctaccagaaatcagatatgatgatgaaactgaaagagtt
gaagtcggcctggaaaggaatgtacctgttgcgctgttgcgcaaacctgtgtcatcaaca
tttacatataacaatgaaaacataccatgtaatctattatttttccagctaatggaccca
acatctgaagatgaagaccagggtagaggggagataacaatagtcttattagaagatgga
acaatgtgtacaatcaataaatcaggaggacagcttcttacacaggaaactttggacaat
tttgtcacccttggaaaggcacaaataaaaattgttaatgattgtattgctaaagcttta
attgagagaatggatgagtcttaa
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