Macrobrachium nipponense (oriental river prawn): 135196528
Help
Entry
135196528 CDS
T09903
Name
(RefSeq) LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03030
DNA replication
mnz03420
Nucleotide excision repair
mnz03430
Mismatch repair
mnz03440
Homologous recombination
mnz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135196528
03420 Nucleotide excision repair
135196528
03430 Mismatch repair
135196528
03440 Homologous recombination
135196528
03460 Fanconi anemia pathway
135196528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mnz03000
]
135196528
03032 DNA replication proteins [BR:
mnz03032
]
135196528
03400 DNA repair and recombination proteins [BR:
mnz03400
]
135196528
Transcription factors [BR:
mnz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
135196528
DNA replication proteins [BR:
mnz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
135196528
DNA repair and recombination proteins [BR:
mnz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
135196528
MMR (mismatch excision repair)
135196528
DSBR (double strand breaks repair)
HR (homologous recombination)
135196528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
AbiJ_NTD4
GDH2_N
Motif
Other DBs
NCBI-GeneID:
135196528
NCBI-ProteinID:
XP_064079446
LinkDB
All DBs
Position
18:complement(20841823..21093803)
Genome browser
AA seq
628 aa
AA seq
DB search
MRPPCYGVQAKLAEVPYYCFSCTVVERQAALLITKGYLKKDMIEGRQPEEPYLQILSMKK
MPSGGQERYRLLVSDGQWCSSFAMLATHSNGLVASGEIDNNCIIKLNRYICNTVQESKKI
LIILDLDVVKSGEEVGGKIGEPVTYDPAKNTGAANRPAPTEQKERTLPPSVTAQRNPPNV
GASPSMTPGGGSVHPIASLTPYQNRWTICARVTNKSGIRTWSNSRGEGKLFSMDLLDESG
EIRATAFNEQLDKFYDMIEINNVYYITGGTLKTANKQYSNLNNDYELTLNKMTEVTPCHE
NTAIPSMQYSFVPLDQLEKVTKDSVVDIIGVCKEAMDVSVITQRTTGRELKKRDLLVIDD
SAHEVRVTLWGTSAENFDGSLQPVLAIKGAKVSDFGGVSLSLLSSSSFQINPDIREAHKL
KGWFDNGGSTAESINLSNQRSGGPSGGMGNVYKTFGEAKLENLGGRQDQADYYSVKASVV
LIRKENCLYPACPSANCNKKVVDLNNGMYRCEKCNQEYDNFNWRLMVSANLADISDNQWV
TLFQDQAEAILGVSAQELGGMRDNNNEAFQNIFAEATFKSFNFRLRVKMETYNDESRLKN
TVAVCTPIVPKEYNKRLISEIKQMIGQA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgagaccaccatgctatggagtccaggcaaaactagctgaggtaccatattactgtttc
agttgtacagtggtagaaaggcaggcagcattattaattactaagggttacctgaagaag
gatatgattgagggtcgccaacctgaggaaccttaccttcaaattctgtcaatgaagaaa
atgccgagtggtggacaagaaaggtaccgcctcttggtatcagatggtcagtggtgtagc
agctttgctatgcttgccactcactcaaatgggttggtggctagtggtgagatagataac
aattgcatcatcaagttgaatcgttacatatgtaatactgtccaggagagtaaaaagatc
ttgatcatcttagaccttgatgttgtcaagtcaggagaagaagtgggagggaaaattgga
gagcctgttacctatgatcctgccaaaaacacgggtgctgctaatcgtccagcccccaca
gaacagaaagaacgaacacttccaccatcagttactgcacagcgaaatccacccaacgtt
ggtgcttcaccctcaatgactccaggtggtggtagtgttcatccaattgcatcgctgact
ccataccaaaacaggtggactatttgtgctcgagttactaacaagtcaggaattagaaca
tggtctaactcaagaggtgaaggcaaactcttcagtatggatcttcttgatgaatctgga
gaaataagagccactgctttcaatgaacagttggacaagttttatgatatgatagagata
aacaatgtttattacattactggtggaactctgaagactgcaaataagcaatactcaaat
ctcaataatgattatgagctgacactgaataagatgacggaggtgactccatgtcatgag
aatactgctattccatctatgcagtactcatttgtgcccttggatcagttagaaaaagtt
acaaaggactctgttgttgatatcattggtgtctgcaaagaagctatggatgtatcggtt
attacacaacgaacaacaggaagagagctgaagaaacgagatttgctcgttattgatgac
tcagcacatgaggtcagagttactctttgggggacaagtgcagaaaattttgatggatca
ttacaacctgtccttgcaattaagggtgcaaaggtttcagattttggcggtgtttcattg
tcccttctgtcttcatcatctttccagatcaatcctgatataagggaagcacacaaactc
aagggttggtttgataatggtggttccacagcagagtctatcaacttatccaaccagagg
agtggtggtccctcaggtgggatgggtaatgtttacaaaacatttggagaagcgaaactg
gagaatttaggtggaagacaagaccaagctgattactactccgttaaagcctctgttgtt
ttgataagaaaggaaaattgtttatacccagcatgcccatctgctaattgcaacaagaaa
gttgtggatctcaataatggcatgtatcgctgtgaaaaatgcaatcaggagtatgataat
ttcaattggagactgatggtttcagctaatcttgctgacattagtgataaccagtgggtt
acactgttccaagaccaggctgaagctatactaggggtgtctgcccaggaattaggaggt
atgagagataacaataatgaagctttccagaacatttttgcagaagcaacattcaaaagt
ttcaactttaggctgcgggtcaagatggaaacatataatgatgaaagcagattgaagaat
acagttgcagtttgtacgccaattgtcccaaaggaatacaacaaacgactaatatcagaa
atcaagcagatgattggccaagcttaa
DBGET
integrated database retrieval system
