Macrobrachium nipponense (oriental river prawn): 135196945
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Entry
135196945 CDS
T09903
Name
(RefSeq) exosome complex component RRP41-like isoform X1
KO
K11600
exosome complex component RRP41
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135196945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135196945
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135196945
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
135196945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
135196945
NCBI-ProteinID:
XP_064079860
LinkDB
All DBs
Position
18:complement(29554623..29612973)
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AA seq
268 aa
AA seq
DB search
MNFGGSFFLFTFKPSTKHLCQKGNGEDTMEIISPEGLRQDGRTPTCLRTISCRLGLYDRP
NGSAYLEMGNTKVLAAVYGPREVRSISKQQLDECVIQCQMSRIAACQGERVRRPRDQRTR
AMSLQISGIFQGAIRKSKYPGSQIDIYVQVLEADGGVMSACVNASTLALIHAGVELVDYV
VSCTASMHKQTPVLDVTHQETVTGCELTISFLPNKEQIISMDTSHPLHQDQFEPVMDLAI
VGCHQVYDNMHQEVEAYLQDKHAIMSHR
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaattttggaggatctttttttctttttactttcaagcccagcacgaagcacctctgc
caaaaaggtaatggtgaagatactatggagataatttcccctgagggtctgcgtcaggat
ggtagaactcctacatgtctaagaacaatcagttgcagattaggtttatatgataggcct
aatggcagtgcttatttagagatgggtaatacaaaggtccttgctgcagtgtatggccca
cgggaggttcgcagtattagtaagcagcaacttgatgaatgtgttatccagtgtcaaatg
agccgaattgctgcttgtcaaggggaacgtgtcagacgtccaagagatcagagaactcga
gctatgagtctgcagatttctgggatattccagggagccatacgtaaaagcaaatatcca
gggtcccaaattgatatttatgttcaggtgctggaagcagatggaggagttatgtctgca
tgtgtaaatgcttcaactttagctttaatacatgcaggagtagaactagttgattatgtg
gtatcttgtactgcatctatgcacaagcaaacaccagttttggatgtcacccatcaagaa
acagttactggctgtgagctaaccatatcattccttccaaacaaggaacaaattatttct
atggatacatcacatcctttgcatcaagatcagtttgaacctgtaatggatcttgccatt
gttggttgtcaccaagtgtatgataatatgcatcaagaagttgaagcctacttacaggat
aaacatgcaattatgtctcatagataa
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