Macrobrachium nipponense (oriental river prawn): 135197073
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Entry
135197073 CDS
T09903
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03030
DNA replication
mnz03410
Base excision repair
mnz03420
Nucleotide excision repair
mnz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135197073
03410 Base excision repair
135197073
03420 Nucleotide excision repair
135197073
03430 Mismatch repair
135197073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnz03032
]
135197073
03036 Chromosome and associated proteins [BR:
mnz03036
]
135197073
03400 DNA repair and recombination proteins [BR:
mnz03400
]
135197073
DNA replication proteins [BR:
mnz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
135197073
DNA Replication Termination Factors
ELG1-RFC complex
135197073
Chromosome and associated proteins [BR:
mnz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
135197073
DNA repair and recombination proteins [BR:
mnz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
135197073
Check point factors
HRAD17(Rad24)-RFC complex
135197073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
AAA_24
Rad17
AAA_22
AAA_30
Mg_chelatase
AAA_assoc_2
AAA_16
AAA_11
Gp44_lid
ResIII
AAA_19
DUF815
SLFN-g3_helicase
RuvB_N
AAA_5
ATPase_2
AAA_7
bpMoxR
AAA_28
Motif
Other DBs
NCBI-GeneID:
135197073
NCBI-ProteinID:
XP_064080092
LinkDB
All DBs
Position
18:complement(54033934..54043908)
Genome browser
AA seq
357 aa
AA seq
DB search
MHAFLKTGKLGTDAGQAGPSKEKPVKRKAPVPWVEKYRPKTVDDVAYQDEVVAVLKSTLQ
GADLPNLLFYGPPGTGKTSTILAAARQLFGDLYRQRVLELNASDERGIQVVREKVKSFAQ
TSVASTRPDGKPCPPYKIIILDEADSMTRTATAALRTTMEKQSKTTRFCLICNYVSRIIE
PLTSRCSKFRFKPLARDILIKRLSYICEEENIQYEDGVLEAFIETSGGDLRRAITTVQST
SRVRGKDEKITKLDVYEVTGVVPESWLTELMEVCATDSYEKLSDFLSRLMAEGYAGSQIL
SQVHDLLIENERLSDSAKAVILDKLAMCDHRLMNGGDEYLQVLDLSCTIMKQICHSK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcatgccttcctcaaaactggaaaactgggcacagatgctggccaggctggccctagc
aaggagaaaccagtaaaaagaaaggctccagttccctgggttgaaaaataccgaccaaaa
acggttgatgatgtagcataccaagatgaagttgttgctgttttaaagagcacactacaa
ggtgcagatttacccaacttgctgttttatggaccacctggtactggtaaaacatcaaca
atattggcagctgccagacaactttttggggacctgtaccgtcagagagtattagaatta
aatgcatctgatgaaagaggaattcaggtggttcgagaaaaagtgaaatcgtttgcccaa
acttctgttgcaagtaccagacctgatggcaagccttgtccaccatacaaaattataatt
ttggatgaggctgattcaatgacgcgtacagcaacagcagctctgcgtacgacgatggaa
aaacagagtaaaacaacacgattctgtttgatctgcaattatgtttcaagaattattgag
ccccttacttcaaggtgttctaagtttcgtttcaaaccactggcccgagacattttgatc
aagaggttatcatacatttgtgaagaagaaaacatccaatatgaagatggtgtactagaa
gcatttattgaaaccagtggtggtgacttgagacgagccatcactacagtccagtcaaca
tcacgagtaagaggaaaggatgaaaagataacaaaactggatgtttatgaggttacaggt
gtcgttcctgagtcttggttgactgaattgatggaggtctgtgcaactgattcctatgag
aaactaagtgacttcttgagtagattaatggcagagggttatgctggaagtcagatatta
tctcaagtgcatgacctgttaattgagaatgaaaggctcagtgattctgcaaaggctgtt
atattggataaactagctatgtgtgatcatcggcttatgaatggtggtgatgaatatctc
caagtcttggatttgagctgcacaattatgaaacaaatatgtcattcaaagtaa
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