Macrobrachium nipponense (oriental river prawn): 135197768
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Entry
135197768 CDS
T09903
Name
(RefSeq) exosome complex component 10 homolog isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135197768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135197768
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
135197768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
Motif
Other DBs
NCBI-GeneID:
135197768
NCBI-ProteinID:
XP_064080920
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Position
21:complement(9764950..9825311)
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AA seq
906 aa
AA seq
DB search
MEPNRVNGSCKEVFLANKTVEDYIKDVMVCVRNCQKLSGELSGWHHYRDYSGVERTIAQV
NGSLMSLISNIFKHQDIKIGLTRHKLLDQFDMVREGNDAVFERINSDIDEASGLRKNADA
EILDPSSLKKVEGPSVATGKSVVLLASRSVQKPQIFFEKKVDNSHKRPFLPLIDEKPNNI
KPLSIMLCIDDSGKEYYSHPYEYELQHWNPAPSQLEPVTPQLPNPVADTPIIMVETVEDL
ARMVSELKECKAFGFDIEHHSYRSYQGLACLMQISTREMDYIIDPLALRGKLTILNEVFT
DPKITKVAHGADHDILWLQRDFGVYIVNLFDTHQAAVVLEYPHRSLAALLSRFCSIEANK
VYQRADWRIRPLPEDFTNYARQDSHHLLYIFDMMRNELIQKGNNLNNLITAVYSRSAEIC
AKRYEKPIVGPDSHMEIYRRSRKTFNSRQMFALQALYLWRDRVAREQDESPEYVLPKHML
LQICEVLPKEMQGILACCNPIPPLVKTELLTMHTLIREARQQTLIDIKPSILENQLASCT
TTDDLGSELINRHDLSQCEENPVGLAVLINPGDNLLGDLFEEHKIKVALKELSQMFGCIK
TNLDHKLKGHYELSKQFISPFERYTTYLEMKPFIEGEKKKGADQDRIQRIMDHFLTLTEN
TERDLEAEREDEVRAFRQENENVEAPAPLNLPEVSFVLMKGEQEEALISNERQITHQAID
SFLESARMSANPRQDTEKKEEPDRVGQLLLHFRSLSGKRSPELKPRSSPSDEEMADVSSN
VPEETKKKPVTKKKPVKKKKKGVKKVILADQIKKKPKNKSTKRPSTGTTDETPPKKMKVE
EGDEVDSENEEGELSDSQSEKNDEPSGFDYASADYTIFQKARLKASHKRPFKGKIRGKMD
KRRGKY
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggaacccaacagggtaaacggcagttgcaaggaagtcttccttgcaaataaaactgtg
gaagattacataaaagatgttatggtctgtgtccgaaattgtcagaagcttagtggtgag
ctttcaggatggcatcattatcgagactactcaggagtggagcgtactatagcacaggtc
aatggcagcttgatgtctttgatcagcaatatattcaaacaccaggatatcaaaattggc
ctaacacggcacaaattacttgatcagtttgacatggttcgtgagggaaatgatgcagtc
tttgagaggattaattcagatattgatgaggcctcaggtttgaggaagaatgctgatgca
gagatccttgatccctccagcctgaaaaaagttgagggtccttctgttgctactgggaag
agtgttgttctccttgcatcccgcagtgttcagaaaccccaaatattcttcgagaagaaa
gtagacaactctcataagagaccttttctgcctctgatagatgaaaagcccaacaacata
aagcctctctcaattatgctgtgtattgatgacagtggaaaagaatattattcacatcca
tatgaatatgaactccaacactggaaccctgcaccttcacagcttgaaccagtaacacct
cagcttcctaatccagttgcagatactcctattatcatggtagagacagtggaagatttg
gcaagaatggtttcagaactaaaagagtgcaaagcatttggttttgatatagagcatcac
tcatatagatcatatcaaggacttgcatgtcttatgcaaatatcaacaagggagatggac
tacataattgatccattggcactccgaggcaagcttacaattcttaatgaagtattcaca
gacccaaaaattacaaaggtagcccatggagcagatcatgacatcctctggctccagcgt
gattttggtgtctacattgtcaatcttttcgatactcatcaagcagctgttgtattggaa
tatccccaccgatctctagcagctcttctgtcccgtttctgcagtattgaggcaaataaa
gtgtatcaaagagctgactggagaataaggccactgccagaagattttaccaactacgca
agacaagattctcatcatttgttatacatatttgacatgatgaggaatgaattgattcaa
aagggaaacaacctgaataatctgataactgccgtatacagccgatcagctgaaatatgc
gcaaagaggtatgagaaaccaattgttggtcctgatagtcacatggaaatataccgtcga
agcagaaagacttttaattccagacagatgtttgcactgcaggcattgtatttatggcga
gaccgagtcgcaagggaacaggatgaaagcccagagtatgtgctacctaagcatatgtta
ttgcaaatttgtgaagttttacctaaagaaatgcaaggaattcttgcatgctgtaatcct
atccccccattggtcaagacagaacttttaacgatgcatacactcattagggaagcaagg
cagcaaacgctcatagatataaaaccttcaattcttgaaaatcagctcgcctcttgtaca
acaacagatgaccttggctctgaacttataaacaggcacgacttatcgcaatgtgaagaa
aaccctgtgggattggcagttcttattaacccaggcgataatctacttggcgacttgttt
gaagagcacaaaataaaagtagcactcaaagaattatcacagatgtttggatgcattaag
actaatttagatcacaagttgaaaggacactatgaactatcaaagcagtttattagtcca
tttgaaaggtacacaacttacttagaaatgaaacctttcatagagggagagaaaaagaaa
ggtgcagatcaggatcgtattcagaggattatggatcacttcttaactttgaccgaaaat
acagagagagatttggaagcagaaagggaagatgaagtaagagcattcagacaagaaaat
gaaaacgttgaggctcctgctccattaaacctgccagaagtctcctttgtattgatgaag
ggagaacaagaagaagcattgatttccaatgaaagacagataactcaccaagcaattgac
tctttcttggaatcagctcgaatgagtgcaaatccacgccaagatacagaaaagaaagag
gaaccagatcgtgttggccaattactgcttcattttagaagtctttcgggaaaacgttca
cctgaattgaaacctaggtcatcaccatctgatgaagaaatggctgatgtgtcaagtaat
gttccagaggagacaaagaagaaacctgtcacaaagaagaaacctgtcaagaagaagaaa
aagggtgtaaagaaagtaatacttgcagatcagattaagaagaagcccaaaaataagtct
accaagagaccgtcaactggtacaaccgatgagactccaccaaaaaaaatgaaagtggaa
gagggggatgaggtagatagtgaaaatgaagaaggggaactatccgattcccagtctgag
aaaaatgacgaaccctcaggatttgactatgcttctgcagattataccatcttccagaaa
gcaagactcaaggcatcccataagaggccatttaagggtaaaattagaggaaagatggac
aagagacgtggaaaatattga
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