Macrobrachium nipponense (oriental river prawn): 135197930
Help
Entry
135197930 CDS
T09903
Name
(RefSeq) WD repeat-containing protein 82-like isoform X1
KO
K14962
COMPASS component SWD2
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135197930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135197930
03036 Chromosome and associated proteins [BR:
mnz03036
]
135197930
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
135197930
Chromosome and associated proteins [BR:
mnz03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
135197930
COMPASS/SET1 complex (yeast)
135197930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_EIPR1
RMC1_N
Beta-prop_WDR35_TULP_N
eIF2A
WD40_RFWD3
WD_LRWD1
Beta-prop_Nup120_160
PROPPIN
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
135197930
NCBI-ProteinID:
XP_064081260
LinkDB
All DBs
Position
21:36136454..36210093
Genome browser
AA seq
264 aa
AA seq
DB search
MPVTLSKRTLNSKKYGVDLIHFTHAKNSAIYSSTKIDDTIRYLSLHDNKYIRYFPGHTKK
VITLSMSPIDDTFISGSLDKSLRLWDLRSPNCQGMMHVGGRPVAAFDPDGLIFAAGINSE
MIKLYDLRSFDKGPFSTFQLSMEKECDWTGIKFSPDGKTILTSTNGSIIRLVDAFSGTPL
KTFTGHLNNKGIALEASFSPDSQFILSGSTDGRIHVWNAETGYKVCALNADHTGPVQCIQ
FNPKYMMLASGCTSMAFWLPAMDE
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcactctatcaaagcgtacgctaaacagcaaaaagtatggcgtggatttaatt
cactttacacatgccaaaaattctgctatctacagttctactaaaattgatgacacaata
cgctacctctcgctacatgataacaaatatataagatacttcccgggacataccaaaaaa
gtgatcactctgagtatgagcccaatcgatgacactttcatatctggctccttggacaag
tctttgagactttgggatctccgttctccaaactgtcagggtatgatgcatgtgggagga
cgcccggtagcagcttttgacccagacggtcttatatttgctgcaggtatcaattcagaa
atgatcaagctctatgatctgaggtctttcgacaaaggtcccttcagtacgtttcaactc
tccatggagaaggaatgtgattggactggcatcaagttcagccctgatgggaaaactatt
cttacatctacaaatggctcaattattcgacttgttgatgctttttctggaactcctctt
aagacctttactgggcacttaaacaacaaaggcattgcccttgaggcatctttcagtcca
gactcccagttcatattgagtggctctacagatggtcgcattcatgtttggaatgctgaa
actggttataaggtatgtgccctcaatgctgaccatactggacctgttcagtgtatacaa
tttaaccccaaatacatgatgttggcatctggttgcacaagcatggcattttggctccca
gcaatggatgaataa
DBGET
integrated database retrieval system
