Macrobrachium nipponense (oriental river prawn): 135198613
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Entry
135198613 CDS
T09903
Name
(RefSeq) LOW QUALITY PROTEIN: transcription activator BRG1-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135198613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnz03021
]
135198613
03036 Chromosome and associated proteins [BR:
mnz03036
]
135198613
Transcription machinery [BR:
mnz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135198613
Chromosome and associated proteins [BR:
mnz03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
135198613
Chromatin remodeling factors
BAF complex
135198613
PBAF complex
135198613
GBAF(ncBAF) complex
135198613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
SnAC
BRK
HSA
QLQ
HDA2-3
ResIII
DEAD
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
135198613
NCBI-ProteinID:
XP_064082433
LinkDB
All DBs
Position
23:10566470..10830575
Genome browser
AA seq
1633 aa
AA seq
DB search
MSAPSPNPGSAASPMGPPQQALSPMPPPQATSPAVGPPQAQSPMGPPQTPSPMGPPVMSP
GPGGPPPAQQGPPPSGPAPGMVPQGAPGPHHPYPQGPQGSQGWQQPPPGPYANSYQPQPQ
QQQQGPGVHHPAQGPPGGPPVSGLPPPTSGGGPNGPSPSGGSYQQENLNALQKAINTMED
KGMQNDPRYADLVSMRAKYGSMGPPPATTGAGTTPGGPPGPPSGPGYGPSGPGGPEGPRP
GLLNASQMHQLRAQIMAYRCIARNQPVPPQVTALVQGRRLDQDPSRAPGPPGPPGPSGPP
GPPGPAGPPGPPVSTGPPGPPTGPPTGPPQGPPVPTTGPPQGPPGPPGPPGPPGPPTMQY
PRHPGPMPGARPPYNGTDPSQTPPPPPSAVTSQPGPNGPXSGTTPRPPVPQAAPGAPVTA
PGGKISRVTPIQKPSGIDPLILLQERENRLAVRIAHRIDELSGLPATMAEDLKMKAQIEL
RALRLLNFQRQLRAEVVGCNRKDTTLETAINIKAYKRTKRQGLREARITEKLEKQQKLEA
ERKKRQKHQEYLNAVLQHGRELKDFHRQNTQKIIKLNKALLMHHMNAEREKQKEQERIEK
ERLRRLMLEDEEGYRKLIDEKKDKRLAYLLTQTDEFIANLTEMVKAHKEDQRLKSKEERK
KQREERRKAREADNSEEGGPQERHIPVMESATGTIVSGKAAPLASNLEAFLTANPGWEVL
PEDDSETSDDENEEVETEKKVLSEEESASPASTENKLDAAEKNPKEVLKKAKVEDDEYKD
VTGEKNYYSIAHTIKETVTEQAKIMVNGSLKEYQVKGLEWLVSLYNNNLNGILADEMGLG
KTIQTIGLITYLIENKKNNGPYLIIVPLSTISNWALEFEKWAPTVQVVTYKGSPQVRRIV
QSQMRATKLNVLLTTYEYIIKDKAVLSKLRWKYMIITRGHRMKNHHCKLTQTLNTFYNAP
HRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILI
IRRLHKVLRPFLLRRLKKEVEAQLPEKVEYIIKCEMSGLQHVLYRSMQSRGVMLCAEDKK
GQKSNTKALMNTIMQLRKLCNHPFMFQHIEEAYCNHAGFSGGIVQGPDIYRASGKFELLD
RILPKLHLTNHRVLLFCQMTQLMTIMEDYLMFKGFKYLRLDGMTKSEDRGELLRMFNTSR
EYFLFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTV
NTVEERILAAARYKLNMDEKVIQAGMFDQKSTGSDRRQFLQAILSNDNEEDEEEDEAPDD
ETINQMIARGEDEFEIFQKVDQDRKSTETRARLMAEDELPEWMLKEEDSEEVDDEEPEEL
GDRRARSKKEVDYSDSLTEKEWLRAIGAVEEDGKEAMDEEEEEVNGGSKSKRGSKGKRRR
DDMDLDDDPKPKKRGRPAREKPNPKNKRVIRQLKRLMDIVIKYEDSDGRVLSEPFMKLPS
RRELPDYYNIIKRPMDIHKILNRIDEGRYDDMNDLEHDFMLLCRNAQEYNEESSMIYEDS
TVMQSVFLNARERIEAEADNVQEEEEEDDDDDDEEEETRVKKGKKSKGEKGRGRRKRVKY
ADDSDDDDDDDDD
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctccaagtccaaatccagggagtgcagcgtcccctatgggtcctccccaacag
gcattgtcaccaatgcctccaccacaggcaacatcacctgctgtaggacctccacaggcc
cagtctcctatgggacctccccagactccttcaccaatgggtcctcctgtcatgtccccg
ggtccaggtggcccaccaccagcacagcagggacctcctcccagtggccctgctcctggg
atggtaccccaaggggcccctggtcctcatcatccttaccctcagggacctcaagggtct
cagggatggcaacaacctccaccaggcccttatgcaaatagctatcaaccacaaccacaa
cagcagcaacaaggtccaggagtacaccatccagcacagggccctccaggtggtcctcca
gtcagtggacttccacctccaactagtggtggtggccctaatggtccaagtcctagtggt
gggagctaccagcaagagaatcttaatgctctgcaaaaggccatcaacactatggaagat
aaaggaatgcaaaacgatccaagatatgcagatttagtcagcatgagagccaagtatggc
agtatggggccacccccagcaacaacaggtgctggcactacacctggaggtccaccaggc
cctccaagtgggcctggttatgggccttctggtccgggtggtccagagggtccaagaccc
ggactccttaatgcctctcagatgcatcagttaagggcgcagattatggcgtatcgttgt
attgctcgtaaccaaccagtacctcctcaagttactgcacttgttcagggccgacgtctt
gatcaggatccatcaagagcacctggtcctcctggaccaccaggaccttcagggcctcct
gggccacctggccctgcagggcctcctggccctccagtttcaacaggacccccaggtcca
cctactggtcctccaactggtcctcctcagggaccacctgtcccaactactggtccacct
cagggtccaccaggaccacctggcccaccaggtcctccaggaccacctactatgcagtat
cccagacatccaggtcctatgccaggggcacgaccaccttacaatggaacagatccatca
caaacaccccctccccctcctagcgctgtaacgtctcaacctgggccaaatggtcccnta
tctggaacaactccaagaccaccagtaccccaggcagcacctggagctccagtcactgcc
ccaggaggaaaaattagtcgtgtaactcccattcaaaaacctagtggaattgatcctttg
atactcttgcaggaaagagaaaacagattggctgttcgtattgctcatcgcatagatgaa
ttgagtggtctcccagctacaatggctgaagatttgaaaatgaaagcccagattgagctt
agagctttacgactcttaaatttccaacgtcagttacgtgctgaggttgttggttgcaat
agaaaggacactactttagaaactgccatcaatatcaaagcatacaagagaaccaagagg
caagggttgagagaagcacgtattacagaaaaattggagaagcaacagaaacttgaagct
gaaaggaagaaacggcagaaacaccaggaatatctcaatgctgtgttacagcatggcaga
gaactcaaggacttccatcgtcagaatactcagaagattataaagttaaacaaggcgttg
ctaatgcaccacatgaatgcagagagagagaagcagaaggagcaggagcgcatagagaaa
gaacgtttgcgtcgtctcatgctggaggatgaagaaggttatcgtaagctcattgatgaa
aagaaggacaaacgattggcatatctgctcacgcagactgatgagtttattgcaaacctc
acagagatggtcaaggcgcacaaagaagatcagcggcttaaaagcaaagaagagagaaag
aagcagcgagaggaaagacgcaaagcacgggaagctgacaatagtgaagaaggtggtcct
caggaacgtcacatacctgtaatggaatcggctacaggaactattgtgagtggaaaagct
gctcctttggctagcaacttggaggctttcttgacagcaaatcctgggtgggaagtatta
cctgaagatgattctgaaacatctgatgatgagaatgaagaggtggaaacagagaagaaa
gtcctttcagaggaggaaagcgcctctccagcatcgactgagaataagttggatgcagca
gagaagaatcccaaagaggtcctcaagaaggcaaaggttgaagatgatgagtacaaagat
gtaactggagaaaaaaattattactccattgcccatactatcaaggaaactgtaacagag
caggcaaagattatggtcaatggttctctgaaagaataccaggttaagggcttggaatgg
ttggtgtctctttataacaacaacctcaatggtattttagctgatgaaatgggtctgggt
aagacaattcagactattggtctcattacgtacctgatagagaataagaagaataatggg
ccttacctcatcattgtaccactttctaccatatctaattgggctttggaattcgaaaag
tgggcaccaactgttcaggttgtgacgtacaaagggtcaccacaggttcgaagaattgtg
cagagtcagatgcgcgccaccaaattgaatgtcctcctcacaacttacgaatacattatt
aaagacaaagctgtactttcaaaactgcgctggaaatacatgataatcacgaggggtcat
cgtatgaagaatcatcattgcaaacttactcagaccctgaacactttctacaatgcgcca
catcgtctcctcttaactggtacacctctccaaaataaactaccagaattgtgggctctt
ctcaatttcctactcccatccatattcaagtcctgttccacttttgagcagtggttcaat
gctccatttgccacaacaggagaaaaggtggagctgaatgaagaagaaaccattttgatt
atccgtcgtttgcacaaagtattacgaccattcttgcttcgaaggttgaagaaagaagta
gaagcccagctacctgagaaggttgaatatatcataaaatgtgagatgtctgggcttcag
catgtactctaccgatcaatgcagtcacgaggcgttatgctctgtgctgaagataagaag
ggacaaaagagcaacaccaaggccctcatgaacactatcatgcagctcagaaaactttgc
aaccatccatttatgttccaacacattgaagaggcatactgcaaccatgcagggttctct
ggaggtattgtgcaaggtccagatatttaccgtgcatctggtaaatttgaactacttgat
cgaattcttcccaagcttcacctcacaaaccatcgtgtattgctcttctgccaaatgacc
cagttgatgacaattatggaagattatctcatgtttaaaggcttcaagtatttaagattg
gatggcatgaccaagtcagaggatcgaggtgaattgctgcgcatgttcaacacatcccgg
gaatatttcctgttcttactctctactcgtgctggagggttgggtcttaacttacaatca
gcagatactgtcatcatctttgattctgactggaatcctcatcaagatttacaggctcaa
gatcgtgcccatcgtattggtcagaagaatgaggtgcgtgtgttacgtctcatgactgtt
aacactgtggaagaacgtattttggctgctgcacgttacaagctcaacatggacgaaaaa
gtcattcaagctggtatgttcgatcagaagtctacaggatctgaccgaagacagttcctc
caagctattctctcaaatgataatgaagaagatgaagaagaggatgaagctccagatgat
gagaccatcaatcagatgattgctcgaggggaagatgagtttgaaatcttccaaaaagtt
gatcaagatagaaagagcacagaaaccagggcacgtctaatggcagaagatgaattgcca
gaatggatgttgaaggaagaagattctgaggaagtagatgacgaagaaccggaagagctt
ggtgatcgtcgagctcgttcaaagaaggaggttgattactccgatagcttaacagagaaa
gaatggctacgtgccattggagcagttgaagaggatgggaaggaggccatggatgaggaa
gaagaggaagtcaatggcggtagcaagagtaagagaggttctaaaggaaaacgtaggcgt
gatgacatggacctggatgatgatcctaagcctaagaaacgaggcagacctgccagggaa
aaacctaatccaaaaaataaacgtgttattcggcagctaaaacgtttaatggatattgtc
atcaaatatgaagacagtgatggtcgagtacttagtgagccatttatgaagttaccgtca
cgtcgtgagctccctgattactataacattattaagagaccaatggatatccacaagatt
ctcaataggattgatgaaggaagatatgatgatatgaatgaccttgaacacgattttatg
ttgttgtgtcgaaatgcccaagaatacaatgaagaatcatccatgatatatgaagactct
actgtcatgcagagtgttttcctcaatgcacgagaacgtattgaagctgaagctgacaac
gtgcaagaggaagaagaggaagatgatgacgatgatgatgaagaggaagaaaccagagtg
aagaaaggcaaaaagagcaagggtgaaaaaggcagaggaagaaggaaaagagtaaaatat
gcagatgattctgatgatgacgatgatgatgatgatgattga
DBGET
integrated database retrieval system
