Macrobrachium nipponense (oriental river prawn): 135198686
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Entry
135198686 CDS
T09903
Name
(RefSeq) DNA polymerase beta-like
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
135198686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnz03400
]
135198686
Enzymes [BR:
mnz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
135198686
DNA repair and recombination proteins [BR:
mnz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
135198686
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
135198686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
NTP_transf_2
MG3
Cdd1
Motif
Other DBs
NCBI-GeneID:
135198686
NCBI-ProteinID:
XP_064082578
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All DBs
Position
22:complement(55298000..55306486)
Genome browser
AA seq
334 aa
AA seq
DB search
MSGKRKAPSGDGNLNADFCDFLIELADYERNVNRNIYKYNAYRNAAAVLAQHPKRIESGS
EAKKLKGIGGKIGDKIDEFIKTGSLKKLDKIRADDVSVAINLLTRVTGIGPAKARELVED
GITTIEALHENKDKLNHHQLIGLKHFEDFEKKIPREEIEKIEKILVKEISSLDSDYIVTI
CGSYRRGAKSSGDVDALLTHPSYSSDSGKNSKLLVNVIDKLKKKGLVTDTLSMGETKFMG
VCQLKEDLPFRRLDIRVIPHDQYYCGILYFTGSDIFNKTMRAHALEEGFTLNEYCIRPVG
STGIPGEALPVSSERDVFEYINWTYKEPHERNYT
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcaagaggaaagctccttcgggcgatggaaatttgaacgcagacttttgcgat
ttcttaatcgagcttgcagattatgaaaggaatgttaatcgtaacatatacaagtacaat
gcatatcgaaatgctgcagcagttttggcacaacatcccaagcgaatagagagtggaagt
gaagcaaaaaagctgaaaggaatcggaggaaaaattggcgataagatagatgaattcatt
aaaactggaagtttgaaaaaactggacaagatacgtgcagatgatgttagtgttgctata
aatctgctgacccgagtaacaggtattggacctgccaaagctcgagagttagtagaagat
ggaatcaccaccatagaagcccttcatgaaaataaggataaacttaaccatcatcagtta
attgggctgaagcattttgaagactttgaaaagaaaatcccaagggaggagattgaaaag
attgagaaaattttagtgaaggagatttctagcctcgattctgactacattgttaccatc
tgtgggagttatcgccgtggagccaaaagtagtggggatgtggatgcactgcttactcat
ccttcctattcgtcagattcagggaagaattccaaattgttagttaatgttattgacaaa
ctgaagaagaaagggcttgtgacagatactctttctatgggagagaccaaatttatggga
gtgtgtcagttgaaggaagaccttccttttcgacgtctggacatacgggtcattcctcat
gatcagtattactgtggtattttatattttactggttctgatatattcaacaagactatg
agggcacatgcacttgaagaaggttttactctaaatgagtactgcataagacctgtggga
agcacagggattcctggtgaggcccttccagtgtcaagtgagagggacgtttttgagtac
atcaactggacctacaaggaaccccatgaacgaaattatacttag
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