Macrobrachium nipponense (oriental river prawn): 135199333
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Entry
135199333 CDS
T09903
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz04140
Autophagy - animal
mnz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135199333
04148 Efferocytosis
135199333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnz04131
]
135199333
Membrane trafficking [BR:
mnz04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
135199333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Clathrin
WD40
zf-RING_Vps41
zf-RING_5
Beta-prop_EML_2
EIF3I
zf_RING_Vps8_fungal
Beta-prop_HPS5
PEP5_VPS11_N
WDR55
zf_RING_Vps8
zf-RING_2
TPR_7
Beta-prop_EML
zf-RING_11
TPR_17
Beta-prop_WDR19_1st
VPS11_N
Mcl1_mid
Motif
Other DBs
NCBI-GeneID:
135199333
NCBI-ProteinID:
XP_064083341
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All DBs
Position
25:complement(33806816..33847290)
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AA seq
859 aa
AA seq
DB search
MATAAPESDNKEKSPHAEEEEESEEDSEEEEEPKLKYERISGDLREILKRDGASCIAANS
KLMIIGTNWGRIHVLDHQGNKVKGFHPHSGPVTMIDMDDNGDYVASCSHDRKVVVQGLYT
LENSHNLTMESPVRSVALDPNYHKPRSGRRFVVGTNKVTLYEKVMFGQLKPTVLSEGSGP
ARAMKWCGQFLAWATDSGVRVMEMNTRTVITLIKRDHSLALPCDQYPPHLCWPDSRTLIV
GWGDSVKVCRVRERASPLSKVSPGLVDLPPYYLEIVYMFTTDFYVCGIGPLDEHVVVLAY
NKQTDLSLASLGVDSRRPQMRVLEPLQGTFEEISKDVLGIRCYQEYKPANYHLVSLVEDR
QFYIVCPQDVVVAKPRSSDDRIEWLLEHEKFADALELVETSREVHRYNVLTIGRTYLDHL
MAQGSYHEAAKLCTRILGSDKALWEEVVVRFNRVRQLRVLSPHLPLGQGVNLDPVVYQTV
LLDLLQTDHGGFLQVVQDWPGHLYNVSFVINAVLETLARNTNNLVLLQALAHLYSNIDKH
DKALAIYLKLKHKDVFHLIGRHNLYGCVSKHVMELMSLDINSTLDICIQHVDIIEPKNVV
RALGSNQFFLYKYLDALYEQKREESQPFHGQLLALYAWGDRSKLLPMLLTSGAYDLSHAL
EVCQSRCLTAETIHLLSRMGNSVESLRLILEEEQDINWAIRLCKEHDDADLWNRLIEHSL
DKPEYIRELLNNIGTHIDPIMIIRRIPNGLEIPGLRDALVRILHDYDLQIQLRTGCQTIL
AEDGSNLLAKQVSIQNAALPVYGDTVCAACNKKVLSSGNSTLALFGCRHVYHEACLSEGD
LQDVCLVCRKDKKKLFLNA
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgcagctccagaatctgacaacaaagagaaaagccctcatgctgaagaggaa
gaggaatcggaagaggactccgaggaagaggaggaacccaagctcaaatatgaaaggata
tctggtgacctgcgagaaattctgaagagagatggagcatcttgcattgctgccaactcc
aagctgatgatcatcggtaccaactgggggcgaattcatgtcctcgatcatcaaggaaat
aaggtcaaaggattccatccccactcgggtccagtgaccatgatcgacatggatgacaat
ggagactacgtagcatcctgttcccatgatcgaaaggttgtagtgcagggtctgtacact
cttgaaaattctcacaacctgactatggaatcacctgtccgtagtgttgctctggatccc
aactaccacaaaccacgttcgggacgtcgttttgtcgttggtaccaataaggtgacactg
tatgagaaggtaatgtttggccagctgaaaccaactgtgctcagtgagggaagtggccct
gctcgtgctatgaagtggtgtgggcagtttttagcctgggcaactgactctggggtgcgt
gtaatggaaatgaacacgagaacggtcatcactctgatcaagcgagatcatagtttagct
ctgccatgcgatcagtacccaccacatctttgctggcctgattcccgaacgctgattgtg
ggatggggagactctgtgaaggtgtgtcgtgtgagagagcgagcgagtcctttgtcgaaa
gtctcccctgggttggtggatctcccaccgtattacctagagattgtgtacatgtttaca
actgatttttatgtctgcgggatcgggcctctggatgaacatgtggtagttttggcctac
aacaagcaaacagatctctcgttagcaagcttgggagtggactctcgaaggcctcagatg
agagtcttggagccgcttcagggaactttcgaagagatttcaaaggatgttcttggaatc
aggtgctatcaggaatataaacctgccaactatcatttagtaagtctagtggaagacagg
caattctacattgtttgcccacaagatgttgttgttgcaaagccacggagctcagacgac
cgtatcgagtggctcttggagcatgagaaatttgctgatgccctggaattggtggagacg
tctcgagaagtgcatcgctacaacgtcctgaccataggccgcacgtatttggatcacctg
atggcccaaggaagttaccatgaagctgccaaattatgcaccagaatattaggttctgac
aaggcattatgggaagaggtggtagttcggtttaatcgtgtacgacagctgcgcgtgctt
agccctcacctgcctcttggccagggcgtgaacctagaccctgtggtgtatcagactgta
ctcttagacttgcttcaaacagaccatgggggctttcttcaagtggtgcaagactggcct
ggccatctctacaacgtgtcgtttgtgatcaatgcagttctggaaacgctcgctcgaaac
acaaataaccttgttctgcttcaggcgttggcgcatttgtactccaacatcgacaagcat
gacaaagcattagccatttacctcaaattgaagcacaaggatgtgttccacttgataggc
cgtcacaacttgtatggctgtgtgtcaaaacatgtgatggagctcatgtccttagatatt
aattcaacgctggacatctgcattcagcatgttgatatcattgagcccaagaatgttgtt
cgggctctgggtagcaaccagttcttcttgtataagtatttagatgccttgtatgaacag
aagcgggaggaaagtcagcctttccatggtcagttgctcgccttatatgcctggggggat
cgtagcaaactgttgccaatgttgctgacttcaggagcgtatgacctcagtcacgcactg
gaagtttgccagtctcgttgcctcacagctgaaactattcatctcttgagtcggatgggt
aacagtgtggaatcgctgaggctcatattggaagaggaacaagatattaattgggccata
agactttgcaaagaacacgacgatgctgatttgtggaatcgcctcattgagcattcctta
gacaagcctgaatacattcgagagcttttgaacaacattggaacgcacattgatcccatc
atgatcatcagacggatacccaacggtttggaaattccgggactcagagacgccctggtt
aggattctacacgattatgatctccagatacaactaagaactggatgtcagactatttta
gcagaggacggcagtaacctcctcgctaagcaggtctcgatacagaacgctgctctacct
gtatacggcgacactgtgtgcgctgcctgtaacaagaaggttttgtcgagtggtaacagc
actttagccctgttcggatgccgccatgtataccatgaagcttgcttatcagaaggtgat
ttgcaggatgtgtgcctagtgtgcagaaaagacaagaagaaacttttcctcaatgcttga
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