KEGG   Macrobrachium nipponense (oriental river prawn): 135199334
Entry
135199334         CDS       T09903                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
mnz  Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:mnz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mnz03041]
    135199334
Spliceosome [BR:mnz03041]
 Complex B
  Other components
   Complex B specific factors
    135199334
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_ACSF4 Beta-prop_EML ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WD40_Gbeta LisH_TPL Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_Nup120_160 NBCH_WD40 Beta-prop_TEP1_C Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_NWD2_C WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_WDR41 Ge1_WD40 Beta-prop_Vps41 Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_IP5PC_F Beta-prop_BBS7 VPS8_N VPS11_N PROPPIN Beta-prop_IFT122_2nd Beta-prop_WDR11_2nd Tricorn_N DUF7165 FlgD_ig DUF7899 LisH_PAC1
Other DBs
NCBI-GeneID: 135199334
NCBI-ProteinID: XP_064083342
LinkDB
Position
25:33920551..33943269
AA seq 513 aa
MSIEIESADVIRLIQQYLKENNLGRTLRALQEETSITLNTVDSVESFMADINQGHWDTVL
KAIQTLKLPDKKLIDLYEQVVLELIELRELGAAKSVLRNTDPLIMLKQTVPERYVHLENL
IARSYFDPREAYPEGVTKERRRAAIAAALAGEVSVVPPSRLLALLGQALKWQQHQGLLPP
GTQIDLFRGKAAMREQEDEKVPTQLSRFIRFPQKAHVESAHFSPDGQYLVTGSLDGIIEV
WNFTTGKIRKDLKYQEKDSYMMMEAAVLSLAFSRDSEMLSTGSQNGQVKVWRVNTGQCLR
KVERAHSEGVTSLAFNKDNSQVMSTSFDNTIRIHGLKSGKTLKEFRGHSSFVNQATFTQD
GHNIISASSDGTVKVWSVKTTECIATFKSLAGVTSVDLPVYSVHILPKNPDHIVVCNRSN
TVTIMNMQGQTVRSLSSGKREGGDFVACVVSPRGEWIFCVGEDHVLYCFSTSTGKLERTL
NVHEQPVIGMCHHPHQNLLATFSEDCLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctatcgagatcgaatctgcggatgtcatccgtctcatccagcaatacctgaaagaa
aataacttgggacgaacgctgcgagcgttgcaggaggaaacgtccataaccttgaacaca
gtggattcagttgagagtttcatggcagatatcaatcaaggacattgggacacagtactc
aaggccattcagacactcaagcttcctgataagaaactcattgatttgtatgaacaggtt
gtgcttgagctgattgaactgcgagagcttggcgcagcaaaatcggtgttgaggaataca
gatccgcttatcatgctcaagcagacagttcctgaaaggtatgttcatctagaaaatcta
attgcacgctcctacttcgatccccgagaggcctaccctgaaggtgtaaccaaagaaagg
agaagagctgctatagctgctgctttggctggtgaggtgtcagtggtcccgccttcacgt
ctcttagccctcttaggacaggcactgaaatggcagcagcatcagggattgcttccccca
ggaacacagattgatttgttccgaggtaaggcagctatgcgagaacaagaggatgaaaag
gtaccaacacagctgtcacgattcatccgtttcccacagaaggctcacgttgagagtgca
catttcagtcccgatggccaatatcttgttactgggagtcttgacggtattattgaagtg
tggaatttcacaacgggtaagattcgtaaagatctgaagtaccaggagaaggactcctac
atgatgatggaggctgctgttttaagcttggcgtttagcagagattcggagatgctttca
actggctcccaaaacggacaagtcaaggtctggagagtgaacaccggtcagtgcctgcgg
aaggtggagagggcccattctgaaggagttacatctcttgcctttaataaagacaacagt
caagttatgtcaacttcatttgataatactatcagaattcatggcctgaagtctgggaaa
accctgaaagagtttagaggccattcgtcgttcgtcaatcaagcaaccttcactcaggat
ggacacaacattataagtgcatcatccgatggaacagtaaaagtgtggtctgtgaaaacg
acagaatgtatagcaacattcaagtctctggcaggtgttacttctgttgatcttccagtt
tattctgttcacattctcccgaagaatcctgaccacatagtcgtctgtaatcgttcaaac
accgtgacaatcatgaacatgcagggacaaacggtacgttcactgtcttcaggtaaacgt
gaaggtggtgactttgtggcttgtgttgtgtccccgcgtggagaatggatcttctgtgtt
ggtgaagatcacgtgctctattgcttctctacgtcaacaggaaaactggagagaactctc
aacgttcatgagcagccagtgattggaatgtgccaccatcctcaccaaaaccttctcgca
actttcagtgaagattgtctccttaaactttggaaaccttag

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