Macrobrachium nipponense (oriental river prawn): 135199480
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Entry
135199480 CDS
T09903
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135199480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnz03021
]
135199480
03036 Chromosome and associated proteins [BR:
mnz03036
]
135199480
Transcription machinery [BR:
mnz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
135199480
Coactivators
SAGA/TFTC/STAGA complex
135199480
Chromosome and associated proteins [BR:
mnz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
135199480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
ELP3_N
Motif
Other DBs
NCBI-GeneID:
135199480
NCBI-ProteinID:
XP_064083642
LinkDB
All DBs
Position
25:complement(65608934..65662633)
Genome browser
AA seq
898 aa
AA seq
DB search
MATSNSLDEVLCSNPETAAVSAVLAPVDSDLTEPSGALANDDDGGGVRAGGAIGAARKIE
PSIGVRVPANKLVCGGVVAIGGQGLPPPPPPLLRPPAPLSGVLVGHQGSSSTSFSSSNSS
SASSTTSTSSVVYGVAPTPMTGGHQGATVNGGVPVGGTLNANVVVKGLSNKVVVGGGSSQ
PAVIMSKPGTVTAVPSTATPGNVSSLSPAAGMQIINMRPGTIRPAGQGATTTTLGPRMIL
SQAQVRPGQAGSLTLGTFQGLPPGAQGHLLVKTENGQLQLLRVNTAAAPAAPGQISGTTV
TTTALQQAPNAAYRFQQPQGGTVAVRSVMVSSTAAPRPNTIILQSQASNTAVLSTATTTT
TIATQAASTGTVTTIPAVPVSTVAGTIITPTTLTSATPATQAPQPTTTTTTTTAGQTITA
ESAKTKCKNFLATLLKLANEQRAPVARNVRNLIQGLIDARVEPEAFTEELQKDLNSSPQP
CLVPFLKKTLPYLRVSLARGELTIDGVRPPPLSSVTPVTGVTTVIPTMSITRPGTPAASG
TVRMVPPTAATATTVVQRPPNATATSTRVVAQQVQQVRVQSGKTVVTTVRQTPSTQTTTA
PITTTTTTTTTATVPTVTKAVTVNKAIPTKDKDKSKDKVFTYSSSYTSSGVTDDDINDVA
AMGGVNLGEESQRILDSTGFVGTQIRSCKDENFLLTAPLSQRIRQICSKYGLGDAPKDVV
ALISHATQERLKTIVEKLAVISEHRLDIIKSDNRYEVHQDVKGQLRFLEELDKLEKKRKD
EQEREMLLRAAKSRSKSEDPEQAKLKAKAKEMQRVEMEEMRQRDANRTALNALQGPKKKP
KLDLSSAEEGGTFSGTFTQKPMPLRPRIKRVNMRDLMFLMEQEKELNKSLLLYRSYLK
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagtaacagcctggacgaggtgttgtgcagtaacccggagacagctgctgtc
agtgccgtgctcgcgcccgtcgacagtgacttgacagagccttccggagccctcgcgaac
gacgatgacggtggaggcgtgcgtgcgggcggtgcaataggggcggccaggaagatcgag
cctagtataggggtccgtgtcccggcgaataagctagtttgtggtggcgtggtggcgatc
ggcggccaagggcttcctcctcctcctcctcctctcctgcgacctcctgctcctctcagt
ggcgtcctcgtcggccaccagggtagttcgtcgacgtccttctcctcctccaactcctcc
tccgcctcctccaccacctccacctcctccgtcgtctatggtgtagccccaacgcccatg
acagggggtcaccagggggcaacagtgaacggcggggtgcccgttgggggcacgctgaat
gccaacgtcgtcgtgaagggactcagcaacaaggtggtggtggggggagggtcttctcag
cccgctgtgatcatgtccaagccaggcactgtgactgctgtgccctccacagccaccccg
ggcaacgtgtccagcctgtcccccgcggcgggcatgcagatcatcaacatgcgcccaggc
accatcaggcccgccgggcagggcgccaccaccactaccctcgggcccaggatgatcctg
agccaggctcaggtccgcccgggtcaggcagggtcactgaccctgggaacatttcaagga
ttaccccccggagcacagggccatctgctcgtcaaaactgaaaacggccagttacagctc
ctgcgtgtcaacacggccgctgcacctgctgccccgggccagatttcaggaacaactgtg
acaaccacagctttacaacaagcccccaatgctgcctatagatttcaacagccacaaggt
ggcacggtcgcggtgaggtcagtcatggtgtcgtcaacggccgcaccacgtcccaacacc
atcatcctccagtctcaagccagtaacactgcagttctttctacagcaaccaccaccact
accatagctactcaagcagcgtcgactgggacagttaccaccataccagcagtacctgtg
tcaacagtagctggaacaatcatcactcctaccactctcacctctgccaccccagcaacc
caagcgcctcaacccaccaccaccaccaccacaacaactgcaggacaaaccatcacggca
gagtcagcaaaaactaagtgtaaaaacttcttagccacgttattaaagttagcaaatgag
cagcgagcaccagttgctcgcaatgttcgcaacctaattcagggattgattgatgccaga
gttgaaccggaggcatttactgaggaactgcagaaggacctgaactcctcccctcaacca
tgccttgttcctttcctcaaaaaaacattaccctatctacgtgtgtcgttggcgagagga
gagcttaccatcgatggtgttcgtcctcctccattatcatcggttacacctgttacgggt
gtcactacagtcatacctactatgtctataacaaggccaggaaccccagctgcatcagga
acagtgcggatggttcccccaacagcagccacagctacaactgtagttcagcgacctcca
aacgccacagcaacatctacaagagtcgttgcgcaacaagtacaacaggtgcgtgttcag
agtgggaagaccgtagtgacaactgtaaggcagactccgtcaacgcaaaccactactgca
cccatcaccactactaccaccaccaccaccaccgccactgttccaactgtgaccaaagct
gttaccgttaataaagcgattcctaccaaagataaagataaaagtaaagacaaagtattt
acttacagcagttcctatacgtctagtggcgtgaccgatgacgacattaacgatgtcgct
gcaatgggaggggtcaacctgggcgaggagtcgcagagaatcttggactcgacgggcttt
gtggggacgcagatacggtcttgtaaagatgaaaattttttattaaccgctccattatca
caaagaatacggcaaatatgctcgaaatacggcttaggagatgctccaaaggacgttgtg
gctctcatatctcatgcaacacaggaaagattaaaaactatcgtggaaaagttagcagtt
atatcagaacacagattagatatcattaagagtgacaaccgttatgaagtacaccaagat
gttaaagggcaactccgttttttagaagaactagacaaactagaaaagaagcggaaagat
gaacaggaaagagagatgcttttaagagcggcaaagtctagaagtaaatcggaagatcca
gaacaggcgaaattgaaagctaaggctaaggagatgcaacgtgtggagatggaggagatg
aggcagagagatgcaaatcgaacggcactcaatgctttacaagggcctaagaagaaaccc
aagcttgatctgtcatctgcggaagagggtggaacatttagtggaacttttactcagaaa
ccgatgccattacgacctcgcatcaagagagtaaatatgagagatctaatgtttttgatg
gaacaagaaaaagaactcaacaaatcattattgttatatcgctcgtatctcaagtag
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