Macrobrachium nipponense (oriental river prawn): 135199864
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Entry
135199864 CDS
T09903
Name
(RefSeq) laminin subunit gamma-1-like isoform X1
KO
K05635
laminin, gamma 1
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz04512
ECM-receptor interaction
mnz04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135199864
04518 Integrin signaling
135199864
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GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
Laminin_B
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
135199864
NCBI-ProteinID:
XP_064084070
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Position
23:complement(28133268..28272432)
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AA seq
1667 aa
AA seq
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MARSCLLRTTTAAVGQVFLKLAVVLVCCVCNSRGQYGQYPSVFSQGILQTFEPIEADSGR
TSRCYNDKGLPQKCVPEFVNAAFSRPVEVTNTCGEYRPQEYCLQTGGYGARQACEICNAY
VPELSHPAYYLTDFNNNDNHTWWQSETMFEGIQYPNEVNITLSLGKAFDITYVRLFFRSP
RPESFAIYKRTETDGEWIPYQYYSATCRDTYGLLDSDYVQKEFETRALCTSEFSDISPLT
GGNVAFSTLEGRPSAYNFEDSAELQEWVTATDIRIILNRLNTFRDEVFKDPKVLKSYFYA
ITDFAVGGRCKCNGHASACVDSTGLRGEFSLVCRCEHNTAGPDCGECLPFYNDAPWARAT
SKDAHECRACNCNGYSSRCYFDQELYDRTGHGGHCLDCAANRAGPNCQRCRDNYYEREDG
VCIACNCNEIGSRSLQCASDGLCQCKPGVTGDKCDKCADNYFDFGPQDRAFGIEGCKPCG
CNVAGSRDNEASCDPTSGVCVCKKHVEGQQCDQCKPGYFNLDQGNVFGCTPCFCYGHSSI
CSSAHGYSKGVMVIPVTVDCVVESGFVRGEERWGAQESSGQEIKLNFNPVVQSLGVAAVG
RENVYFVAPDRFLGDQRASYNHDLSFLLRIGELGPQPSTEDIILEGAGLTISAPIFAQGN
PLPSTEKQEYVFHLHEDSRFGWSPRLVSHDFMSLLSNLTAIKIRGTYTYDGKGFIDDVKL
ETARRGVFGDPATWIEMCTCPDGYVGQYCESCAPGYRHEPSNGGPFASCIPCNCNNHADI
CDSETGRCICQHNTAGDTCERCAKGYYGNALKGTPDDCQPCPCPNGGACFLLPDDQVACL
ECPKGYAGPRCDLCTDGFFGDPKGRHGPPRPCERCDCNGNIDPNAVANCNRTTGECLKCI
YNTGGFYCDQCLSGFYGDALALPKGDCRPCHCNVYGTVSERYGPPVCDQVTGQCQCKPHV
TSLKCDQCDPGYWNLTSGVGCEPCSCDPVGATNGTCDVHSGQCFCREGVTGRKCDMCEPF
HYGFSREGCKPCDCDHVGSVSLQCDATGQCQCRENVEGRRCDRCRKNTYDKQAGCRDCPP
CYNLVLDSVSIHGERLAELERLLADIVSNPTVLSDEAFEETLRSVLVQVEELWNDAREAA
KSGGDRTVAEHIDELNERISGVQELLAKIREALTKGSNFAKQGEVNITQAEDIIQRAREA
LSNAQIYLDVQGMDALNKAVDRSNQFGQQSARMSEIAREARLLADEHEKDADNIEGIAYE
ARNTSSEAHALARKAIDDQKKISEVIKGLINNAVDLSSLHDETMQMANESLVSARNVYRE
ALAISTEASSIAIPVIDAASLREQAAEIGEEAERIKKETKDLMDQRSDLIVDVEAQLIET
SDLVEQGWIQQQITSELLADTFTAEGQAKDAIKKAEKILAEAKNTLTVLEGFDKQVQESR
EEAQDALSKVEEIEKMIEEAEARTKEAEDALMGAESDAKDARDTAVEAQGTAEEASKQAG
DVRVKADATKSEAISLRDEAEDLSSRVTSTDSNVRLYEAQVEADRQQVMEAQEKANQAKD
RANEASARVREAQELVQEILGILEHSPDLNPDELAALERRLEQAQQTYYQSGVEAVVNEL
SESRSWQERQITLYEEEIKRLRIEVTNIYEIKISLPDGCYSQTKLEP
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgctcgtgtctgctcaggactaccaccgccgccgtcggccaggtttttttaaaa
ctggcagtagtgcttgtgtgctgtgtctgtaactctagaggacaatatggccagtatccc
tccgtgttctcgcaggggatactccaaaccttcgagcccatagaggccgattcgggcagg
acgtcgaggtgctacaacgataagggtttgccgcagaaatgcgtcccagagttcgtgaac
gccgccttcagccgccccgtggaggtgaccaatacctgtggggagtacaggccgcaggag
tactgcctgcagacgggcggctacggcgcccgccaggcgtgcgagatctgcaatgcctac
gtccccgagctgtcccatccggcctattacctgaccgatttcaacaataacgacaaccac
acgtggtggcagtcggagaccatgttcgagggcatccagtacccgaatgaggtcaacatc
actctcagcctaggtaaggccttcgacatcacgtacgtccgtctatttttccggtcgcca
agacccgaatccttcgccatctacaagcgtacagagaccgacggggagtggatcccttat
cagtattatagcgctacctgtcgcgacacatacggcctcctcgattcagactacgttcag
aaggagttcgagacgcgggcgctgtgcacgagcgagttctccgacatctcgcccctgacg
ggtggcaacgtggccttctccaccttggaagggcgcccctccgcctacaatttcgaggac
agcgctgaactgcaggaatgggtaacagccacggatattcggataatactcaatcgcttg
aacaccttccgtgacgaagtgttcaaggatcccaaggtactgaagtcctacttctacgcc
atcaccgattttgccgtcggagggagatgcaaatgcaacggccacgcctccgcctgcgtg
gattcgacggggctcaggggcgagttctccctggtgtgccgttgcgagcacaacaccgct
ggacccgactgcggggagtgcctgccgttctacaacgatgccccttgggcacgagccact
tccaaggacgcccacgagtgcagagcctgcaattgcaacgggtactccagccgttgctac
ttcgaccaggaactatacgacaggacggggcacggagggcactgccttgactgcgccgcc
aaccgggcagggccaaattgccagagatgtcgggacaactactacgagcgcgaagatggc
gtctgcatcgcttgcaactgcaacgaaatagggtcgcgaagcctccagtgtgccagcgat
ggcctgtgccagtgcaaacccggcgtgacaggtgacaaatgcgacaagtgtgccgacaac
tacttcgattttggccctcaggatagagcatttggaatagagggatgcaaaccatgcggc
tgcaatgtggcgggtagccgtgacaacgaagcaagctgcgacccgacaagcggagtttgt
gtttgcaagaaacacgttgagggtcagcagtgtgatcagtgcaaacctggttatttcaac
ctggatcaagggaacgtctttggatgcactccttgtttctgctacggccactcttcgatc
tgttcctcagcccatggatactcgaaaggagttatggtaataccagtcactgttgattgt
gttgttgagagtggttttgtccgtggagaagaacgctggggagcacaagaatccagtgga
caggaaatcaaacttaacttcaaccctgtggttcagtctctcggtgttgcggctgttgga
agggaaaatgtttactttgttgcacctgatcgcttccttggcgaccagagagccagctat
aaccatgatctatcatttttgttaagaattggagaactcggaccacagcctagcacagag
gacattattctcgaaggtgctggacttactatttcagcacctatttttgctcaaggcaat
ccacttccaagcacagagaaacaagaatatgtgttccaccttcatgaagactcaagattt
gggtggtccccacgccttgtttcacatgacttcatgtctcttctttcaaacctgactgcg
attaagatccgtggaacttatacttatgatggcaaaggtttcatagatgatgtaaaacta
gaaactgcacgcagaggagtttttggtgacccagcaacttggatagagatgtgcacttgt
ccagatggttatgttggtcagtactgtgaatcttgcgctccaggataccgccatgaaccc
tcaaacggtggaccatttgcttcatgtattccttgcaactgtaacaatcatgctgacatt
tgtgattcagaaacagggcgatgtatatgccagcataatactgctggtgacacgtgcgag
cgttgtgctaaaggatactatgggaatgcgttaaaaggaacacctgatgactgtcagccc
tgcccctgtccgaatggaggtgcttgctttttactaccagatgaccaagttgcttgcctg
gagtgtcctaaaggatatgctggtcctcggtgtgatctgtgcacagacggcttcttcgga
gaccccaaaggccgccatggtcctcctcgaccatgtgagcgatgtgactgtaatggcaac
attgatcctaatgctgtggcaaattgcaacagaacaacaggagagtgtctgaaatgtatt
tacaatacaggcggattttactgtgatcagtgcctgtcaggattctatggtgatgccctg
gcacttccaaaaggtgattgtcgtccatgccactgtaatgtctatggtactgtgtctgaa
agatatggccctccagtttgtgatcaagtaactggccagtgtcaatgcaagccacatgtt
acaagtctcaaatgtgaccagtgtgatccagggtactggaatctcacaagtggagtcgga
tgtgaaccttgtagttgtgatccagtcggggctacaaatggaacctgtgacgttcacagt
ggtcagtgcttctgtcgtgaaggtgtcactggtcgaaagtgtgacatgtgcgagcctttc
cactatgggttttcgcgtgaaggttgtaagccttgcgactgtgaccatgttggttcagtt
tccttacagtgtgatgctactggtcagtgtcagtgccgtgaaaatgttgagggacgcagg
tgtgatcgctgtcgaaaaaatacgtatgacaaacaagctggttgtcgggattgtccgccc
tgttacaacctagtcctggatagtgtcagtatccacggagagcggttggctgagcttgaa
cgccttctagctgacattgtgagcaatccaactgttctcagtgatgaagcttttgaggaa
actctaaggtctgtcttggttcaagttgaggaattatggaatgacgccagagaagcagca
aaatcaggcggagacagaacagtggcagagcacatcgatgagctaaacgaacgtatctct
ggtgtccaagaactgttagctaagataagagaagctttaaccaaaggatctaactttgcc
aagcagggtgaagtcaacattacccaagcagaagatataatccaaagagctagagaagca
ttgtcaaatgcccaaatctatcttgatgtgcaaggaatggatgctctcaataaagcagtt
gacagatcaaaccagttcggccaacagtcagcacgtatgtctgaaatagcaagagaagca
cgattgttagcagatgaacatgaaaaggatgcagataatattgaaggcattgcatatgag
gcccgcaacacatcaagtgaagcacatgccttagctcgcaaagccatagatgatcagaaa
aaaataagtgaagtgatcaagggtctgatcaataatgctgttgacctgtcatcattgcac
gacgagaccatgcaaatggccaacgaatcgctggtttctgctagaaatgtgtaccgtgaa
gctttagcgatcagcactgaagcttcaagtatcgctattcccgttattgatgcagcttca
cttagagagcaagctgcagagattggtgaagaagcagaacgcattaagaaagagacaaag
gatttaatggatcaaagaagtgatcttattgtagatgttgaggctcagctcatagaaact
tcagatctagtagaacaaggctggattcagcagcagataacatctgaactcctggcagat
acatttacagcagagggccaagcaaaggatgctatcaagaaggctgagaagatattagca
gaagctaagaacactttgacagttcttgaaggatttgataaacaagtgcaagaaagtcgt
gaagaagcacaggatgccctaagtaaagtagaagaaattgaaaaaatgattgaagaagct
gaagctcgaacaaaggaagcagaagatgctctaatgggggccgagtctgatgctaaagat
gcacgagacacagcggttgaagctcagggtaccgcagaagaggccagcaaacaagctggt
gatgttcgtgtcaaagcagacgccaccaagagcgaagctatctctttgagggatgaagct
gaagacttatcaagtagggtaactagtactgattctaatgtacgactctacgaggcacaa
gtagaagcagatcgacagcaagtcatggaagctcaagaaaaggctaaccaagctaaagat
agagcaaacgaagcaagtgctcgagtccgtgaagctcaagaactagttcaggaaatcttg
ggtatactggaacactcaccagatttgaaccctgatgagttagctgctttagaaaggagg
ctagaacaagcgcagcagacgtactatcagagtggtgtagaagctgttgttaatgaactc
tctgagtctcgaagttggcaggagcgacagataacactttacgaagaagaaataaaacga
ctgcgtattgaagtgactaatatatacgaaattaagatttcgcttcctgatggttgttat
agtcaaactaaactagaaccttaa
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