Macrobrachium nipponense (oriental river prawn): 135199952
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Entry
135199952 CDS
T09903
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mnz03009
]
135199952
Enzymes [BR:
mnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135199952
Ribosome biogenesis [BR:
mnz03009
]
Eukaryotic type
Pre-60S particles
Helicases
135199952
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GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
135199952
NCBI-ProteinID:
XP_064084146
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All DBs
Position
26:complement(661475..681628)
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AA seq
585 aa
AA seq
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METTWKSLSVKLIAPVKSTIKDLGFKRMTPVQAACIPLLLSHKDVAAEAVTGSGKTLAFV
IPIIQILKQLDTPLRKHDIGAIIISPTRELATQIYEVIEKFLVHVPELTAMLTVGGSYVG
EDIQAFSERGAHILIATPGRLEDLFSRNIENGPSFAAGARRLEVLILDEADRLLDLGFMT
TLNTVFAYLPKQRRTGLFSATQTSDVISLIRAGLRNPLQVRVKDQDSKSDQRTPATLQNY
FMVCQTEKKFDIFVALLRERTKEKTMIFLPTCASVKYFNVLLHKLLKNTIVQAIHGKIKE
KRFKIFDDFRSSEAGVLLCTDVMCRGVDIPKVDWVIQYDPPSNAEAFVHRCGRTARIGNE
GAAVLLLMPSETAYVEFININQKVKLDPLEKPKFVPSLVKKIRNLQIKDRSLMDKANRAF
VSYIQAYSKHDIKFILNIKKLDFGGVATSYGLLKMPRMPELKGVAVKNFEAIEMDFNSVK
YKDKELEKNRQKKLKDFQETGXWPGLKQAPKPKSQPWSEQKDKALRKKKRQEKKQRKRNR
NRLTEEEMEELDEDYRMLKRRRKGKVSDVEFDKHFGIEEEEEAVD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggaaactacatggaaaagcttatctgtgaaattaatagcccctgtcaaatccaccatc
aaagacttgggtttcaagcgcatgacacctgtccaggcagcttgtattccgttgctcctc
agccacaaggatgttgcagcagaagctgtcactggtagtgggaaaactctagcttttgtt
attcctatcattcagattcttaaacagctagatactccattgaggaaacatgatattgga
gccattattatatcccctactcgagagttggctactcagatatatgaggtgatagagaag
tttttggtgcatgtgcctgagctgacagccatgctcactgtaggaggatcatatgttggt
gaggatattcaggcattctctgaaaggggagctcacattctcatagctacccctggcagg
ctagaggacttgttttcccgcaacatcgaaaatggtccaagctttgctgctggagcaaga
agactagaagttttaattctcgatgaagcagacagacttttggatttaggattcatgact
actttaaatacagtctttgcttatctacccaagcagagaagaacaggccttttctcagct
actcaaacttcagatgttatcagcctcatacgtgctggtttaagaaatcccctccaggtc
agagtcaaagaccaagactccaaaagtgatcagagaacgccagcaactcttcagaactat
tttatggtttgtcaaactgaaaagaagtttgatatctttgttgcacttttgagggaaagg
acaaaagaaaagacgatgatttttcttccaacttgtgcgagtgttaaatactttaatgtt
cttttacataaactgcttaagaatacaatagttcaagctattcatggtaagattaaagaa
aaaagattcaaaatatttgatgatttcagatcttccgaggcgggtgttttgctgtgtact
gatgtgatgtgccgtggcgtagatataccaaaagttgattgggtcattcagtatgatcca
ccctctaatgctgaagcatttgttcaccgatgtgggcgtactgcacgtattggtaatgaa
ggggcagcagttttgttgttgatgccatctgaaaccgcttatgtcgagttcattaatatt
aatcagaaagtcaaactggatcccttggaaaagcccaaatttgttccctctttagtcaag
aaaatccgtaatcttcaaataaaggacagaagtttaatggataaggccaatagagccttt
gtgtcctatatacaagcatattcaaaacatgatattaaatttatattgaatattaaaaaa
cttgattttggtggtgttgcaacgagttatggtttgttgaagatgccaagaatgccagaa
ctgaagggtgttgctgtgaaaaattttgaagccattgagatggactttaactctgtaaag
tataaggataaggaactggaaaagaacagacaaaagaaactgaaggactttcaggagacg
gganaatggccgggactgaagcaggcgccaaagccaaagagtcagccctggtccgaacag
aaagataaagctttgaggaagaagaagcggcaggaaaagaagcagaggaagcggaaccgg
aacaggttgacggaagaggagatggaggaattagacgaagactatcgaatgttgaagagg
agacgaaagggcaaagtttcagatgtggagtttgataagcattttggcattgaagaagaa
gaagaagcagttgattaa
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