Macrobrachium nipponense (oriental river prawn): 135200315
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Entry
135200315 CDS
T09903
Name
(RefSeq) DNA repair and recombination protein RAD54B-like
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
135200315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnz03400
]
135200315
DNA repair and recombination proteins [BR:
mnz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
135200315
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
135200315
NCBI-ProteinID:
XP_064084938
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Position
26:60194814..60368683
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AA seq
591 aa
AA seq
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MGYKVPNSFGAILADEMGLGKTLQCIALVWTLLKQGPYGRNPIVRKILVVTPSSLSTNWA
KEFKKWLGKEKLSVFIVDQNNKVEQFTGYHDKPVMIISYEMFVRSAEAIEALKFDLLLCD
EGHRLKNANIKTTSLLTNLSCKRRVILTGTPVQNDLKEFYALVEFVNPGVFGSPLSFRHV
YEDPILASQQPGASAEEKELGANRASQLNQITSLFILRRTQEIISRYLPPKVEFVVFCQP
SETQLMLYDRIVGCRSMRQLLNSMDSCDHLSAILALRKLCNHPALLAQPKDHEGHGDLKR
EIANFLPSHVQPNQFEETDSGKLAVVSCMLWSLVETAREKMVIVSNYTSTLDMLSQLCKK
YNHPLLRLDGSTPSSKRQSLVDTFNDPHSETRVFLLSAKAGGVGLNLIGASRIILYDIDW
NPATDLQAMARIWRDGQKRRVYIYRLLMTGSMDEKIFQRQIKKQNLSGAVVDARESERVH
FSTAELKDLFTMHSDTACLTHDLLKCRCDCSGEVSQVDEQSSEPESERVCQLGKVGNSPR
TFNTTMDQLHNWSHIGQPINPDVIRDQCLVAASDFITFVFRNESSQKETQI
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgggctataaggtcccaaatagtttcggggctatactggctgacgaaatgggtcttggc
aaaactcttcagtgcattgctttggtgtggacgttgctcaagcaggggccatatggaagg
aaccccattgtgaggaaaatcttagttgtcacaccctcgagcctttcgacaaactgggcc
aaagaatttaagaagtggctgggtaaagaaaaactgagtgtgtttattgttgaccagaat
aataaggtcgaacagtttacaggatatcatgataaacctgtgatgataatttcctatgag
atgtttgtccgaagtgccgaggctattgaagctctgaagtttgatcttctattgtgtgat
gagggacaccgtttgaagaatgctaacatcaagactacttcgttattaacaaacctcagc
tgcaagagacgagtgattctcactggaactcctgttcaaaatgatttgaaagagttttat
gctttagttgaattcgtcaatcccggagtttttggttcccccctctcatttcgtcatgtg
tatgaagatccaatccttgcctcacaacagcctggagcatcagcagaagaaaaggaattg
ggtgctaatcgggcatctcagctgaatcagataacttcattattcatcttgagaagaacg
caggaaattatcagcaggtatcttcctccaaaggtcgaatttgtggtattttgtcaacct
tcagagacacagctaatgctctatgaccgcattgttggatgcagaagtatgcgtcagttg
ctgaacagcatggattcttgtgatcacttatcagcaatcttagcactgcggaagctttgc
aaccacccagcgttattggctcaacctaaagatcatgaagggcatggtgatttgaagaga
gaaattgcaaatttcctgcccagtcatgtgcagccaaaccaatttgaggaaactgacagc
ggtaaacttgcagttgtctcttgcatgttatggtctttggtcgaaacggcaagagagaag
atggtcatagtatcaaattacacaagtactcttgacatgctctcccagctttgtaaaaaa
tacaaccatccacttctgcgacttgacgggtcaacgccatcctccaaacgtcagtcttta
gtcgatacgttcaatgatcctcactccgagactagagtttttcttttgagtgcaaaagct
ggaggtgttggactgaatctgataggagcttcgagaataatactctatgacatcgactgg
aatcctgctactgatctgcaggctatggccaggatctggagagatggacaaaagaggaga
gtttatatctacaggctgctaatgactggatccatggatgaaaaaatattccaacgacaa
atcaagaagcagaatctgagtggtgccgtcgtagatgcccgtgaatctgagagagtgcat
ttttccactgcagaactcaaggatttgttcacgatgcacagtgatacagcatgcctcacc
catgatcttttgaagtgcaggtgcgactgttctggagaagtgtcgcaagttgatgaacaa
tcctctgaacccgagtcagaacgagtatgccagttgggtaaggttggaaattctccaaga
accttcaacactacgatggaccagctccataactggtctcatattggacagccaattaac
ccagatgtcattagggaccagtgtttagtagcagcatctgacttcataacatttgttttt
cgtaatgaatcaagccaaaaggaaacacagatttga
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