Macrobrachium nipponense (oriental river prawn): 135200491
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Entry
135200491 CDS
T09903
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 27C-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135200491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135200491
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
135200491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
135200491
NCBI-ProteinID:
XP_064085212
LinkDB
All DBs
Position
23:complement(52079729..52121887)
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AA seq
505 aa
AA seq
DB search
MKKDTAWRDMMTQHPGGGGNGPRGRNIPHDGEEKGKMFVGGLSWETTQETLQRYFGQYGE
VIDCVVMKNSDTGRSRGFGFVTFADPNKVDVVLKSGPHELDGRTIDPKACNPRSMQKQKK
NGNWPKVFLGGLPSNLTETDLRNFFSRFGAVMEVVIMFDQEKKKSRGFGFLSFETEEAVD
RAVAEHFVNINGKQKVEIKKAEPRDASKAQEDAGQWGTPPDNQWGMPVGPPGMPGLNNGM
GPGNMGPPLGPPLGPHNSQMGGHMGTQGMVQGPYQGWGTPPQQQGYPPQGYGAPQGPQGY
QGWGAGQTLQQWGAPNYGSPGGQQYGSFGPMEGGSWGWTSPTSPSSTPQPHERDPYGRNA
PLGALVTGAPGAPSPNLAAAAAPQPGGKTSADYSSWGQYNYNQMTSESTAAAAAVFNHGH
GRGYNDGGPQGQAPAHQGNTRAPYAEDAAKEESIMKGGKRKVVDDDLELCKKRKFHPEQD
KESIENRAVAGYSGDMTVEQYMTYM
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagacactgcatggcgagatatgatgacacaacaccctggcggtggtggcaat
ggtcccagaggacggaatatcccacacgatggcgaggagaaagggaaaatgtttgttggg
ggcctgtcatgggaaacaacccaggagaccctccaacgttactttggtcaatatggcgag
gtcattgattgcgtcgtaatgaagaatagtgacacgggaaggtctagaggttttggcttt
gtcacgtttgcagaccccaacaaagttgatgttgttttgaaaagtggtcctcatgaattg
gatgggagaactattgacccaaaggcctgcaatccacgaagtatgcagaagcagaagaaa
aatgggaactggcctaaagtatttcttggtggtctcccatccaacttaactgagacagac
ttacggaattttttctcgaggtttggtgctgttatggaagtggtgattatgtttgatcaa
gagaagaagaaatccagaggctttgggtttttgtccttcgaaacggaagaggcagtggat
agagcggtggctgagcactttgtcaacataaatggaaagcagaaggttgagataaagaag
gcagagccacgagatgcaagcaaggcgcaggaggatgctggtcagtggggcactcctcca
gacaatcagtggggaatgcctgttggaccccctgggatgcctggactcaataatggaatg
ggcccaggtaatatgggtcctcctttagggccccccttaggacctcataatagtcagatg
ggagggcacatgggaacccaaggaatggtccaaggcccgtaccaaggctggggtactcct
ccgcagcagcagggatacccaccgcaagggtatggtgccccccagggccctcaaggctac
cagggttggggtgcaggccaaacactgcagcagtggggtgcacctaattacgggtctcca
ggaggccagcagtacggaagtttcggaccaatggagggtggatcgtgggggtggacgtcc
cccacctctccctcctccacacctcagccacacgaacgggatccatatggacgtaatgct
ccccttggcgctttggtgacaggagcgcctggtgccccgtcacctaatctagccgctgca
gcggctcctcagcctggggggaaaacctcagcagattatagttcctggggtcagtacaac
tacaaccagatgacaagtgaaagcactgcggctgcagcagcagtgttcaatcatggtcat
ggtcgcggttacaacgatggtgggcctcagggacaggcacctgcccaccagggcaatact
agggccccctacgcagaggatgcagccaaggaagagagcataatgaaaggagggaagagg
aaagtagtggatgatgatttggagttgtgtaagaagaggaaatttcaccctgaacaggat
aaggagtcaattgagaatagagccgttgcaggatattcgggggatatgacagtagagcag
tatatgacttacatgtaa
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