Macrobrachium nipponense (oriental river prawn): 135200892
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Entry
135200892 CDS
T09903
Name
(RefSeq) high mobility group protein DSP1-like
KO
K10802
high mobility group protein B1
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03410
Base excision repair
mnz04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
135200892
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135200892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mnz03036
]
135200892
03400 DNA repair and recombination proteins [BR:
mnz03400
]
135200892
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mnz04147
]
135200892
Chromosome and associated proteins [BR:
mnz03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
135200892
DNA repair and recombination proteins [BR:
mnz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
135200892
MMR (mismatch excision repair)
Other MMR factors
135200892
Exosome [BR:
mnz04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
135200892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
YABBY
Motif
Other DBs
NCBI-GeneID:
135200892
NCBI-ProteinID:
XP_064085703
LinkDB
All DBs
Position
27:21175801..21176965
Genome browser
AA seq
222 aa
AA seq
DB search
MPRGRPRGSLGGGMAIDKPRGRMTAYAYFVQTCRSEHKKLHPEENVQFQEFSRQCSERWK
TMSDVEKKKFHELAEKDKERFESEMSSYPGGGGGRRGRRGRKAPKDPNKPKRALSAFFFY
ANDERSRVRAANPDFSVGEVAKELGRQWNELTEGEKLKYEKQAEEDRARYDREMQIYKSG
GSPAKKMKASNGHPVPEDNDLDDEEVPDDDDDDDLDNGSGDD
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtggtaggcccagaggaagcttaggcggcgggatggctattgacaagccacgt
ggccgcatgaccgcctacgcgtacttcgtgcagacttgccgttcggaacacaagaaactc
cacccggaggagaacgtccagttccaggagttctcccgccagtgctctgagagatggaag
accatgtccgacgtcgagaagaagaagttccacgaactggccgagaaggacaaggagcgc
ttcgagtccgaaatgagctcctacccgggaggcgggggagggcggcgtggacgccggggg
cgtaaggcgcccaaggaccccaacaaacccaaacgtgctctgtcggccttcttcttctac
gccaacgacgagcgttccagggtacgagccgccaacccggacttctccgtcggggaggtg
gccaaggaactcggccgccagtggaacgagttgaccgagggcgagaagctgaagtacgag
aagcaggccgaggaggaccgtgcccgctacgacagagaaatgcagatctataagtcagga
ggttcaccggcgaagaagatgaaggctagcaatggacaccccgtacctgaagataacgac
ctcgacgacgaagaagtccccgatgacgacgatgacgatgatttggataatggctcaggc
gacgattga
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