Macrobrachium nipponense (oriental river prawn): 135202990
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Entry
135202990 CDS
T09903
Name
(RefSeq) LOW QUALITY PROTEIN: chromatin-remodeling complex ATPase chain Iswi-like
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135202990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnz03021
]
135202990
03036 Chromosome and associated proteins [BR:
mnz03036
]
135202990
Transcription machinery [BR:
mnz03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
135202990
Chromosome and associated proteins [BR:
mnz03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
135202990
RSF complex
135202990
WICH complex
135202990
B-WICH complex
135202990
NORC complex
135202990
BRF complex
135202990
NuRF complex (fruit fly)
135202990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
135202990
NCBI-ProteinID:
XP_064088604
LinkDB
All DBs
Position
33:18526278..18538582
Genome browser
AA seq
1021 aa
AA seq
DB search
MSDNEDTVEPMDVGEENSNESSSAETTSSSKTGGEYENKMEVDRSKRFDYLLKQTEIFSH
FMAGNRDKTPSSPLKCKPGRPKKLENRKPSITSDIVDKKSLEAADHRHRMTEQEEDEELL
AEATKSSRIIRFEESPSYIENGEMRDYQIRGLNWMIDLYENGINGILADEMGLGKTLQTI
ALLGYMKTYRNIPGPHMVIVPKSTLRNWENEFKRWCPSLRAVCLIGDQETRSTFIREVMM
PGEWDVCITSYEMCIREKSVFKKFNWRYMVIDEAHRIKNEKSKLSEIVREFRSTNRLLLT
GTPLQNNLHELWSLLNFLLPEVFSSSEDFDAWFNTNNCLGDQTLVERLHTVLRPFLLRRL
KSDVEKRLLPKKETKIYIQLSKMQRDWYTKILMKDIDIVNGAGRTEKMRLQNILMQLRKC
CNHPYLFDGAEPGPPYTTDYHLVENAGKMVVLDKLLPKLQEMGSRVLLFSQMTRMLDILE
DYSVWRKYSYCRIDGQTAHEDRQRQIDDFNSPDSDKFLFMLSTRAGGLGINLATADIVIL
FDSDWNPQMDLQAMDRAHRIGQKKQVKVFRFIQENSMEVKLVERAEVKLRLDKMVIQQGR
LIDNKTNTLAKDEMLAMIRHGANEVFKGKDDEFTDEDIDSIIGRGEIKTEELNKKLESLG
ESSLRQFTLDVPTNSVYQFEGEDYRNKQKAIVGMWIEPPKRERKANYAVDAYFREALRVS
EPKAPKAPRPPKQPVVQDFQFFPPRLFELLDKEIYYYRKTVSYKVPKNPEYMADAGRIQK
EEQRKIDEAEPVTEEEMEERDNLLTQGFLNWSKRDFNQFIKANEKFGRDDIENIAKEVEG
KTPEEVMEYSAVFWERCSELQDCDRILAQIERGEAKIQRRASIKKALDAKMARYRAPFHQ
LRISYGTNKGKNYTEEEDRFLVCMLHKLGFDKENVYEELRAAVRSAPQFRFDWFIKSRTA
LELQRRCNTLITLIERENQELEEKERAERKKGRPKGALYVKSGKRAAGSQDGRGRRKKKV
E
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaacgaggacacagtagaacccatggacgtcggggaggaaaactccaatgaa
tcctcttcagctgaaacaacatcctccagcaaaacgggtggggaatatgaaaacaaaatg
gaagtggataggtcaaagaggttcgattaccttcttaaacagactgaaattttttcacat
ttcatggctggaaatcgagacaaaacgccatcatcccccctcaaatgcaaacctggtcga
ccaaagaaattggaaaacaggaagccttccataactagcgacatcgtggacaagaagagt
ttggaagctgcagatcaccgccatcgcatgacagagcaggaggaagatgaagagctgtta
gcagaggccacaaagtcctcgagaatcataaggtttgaggaaagtccgagctacattgag
aatggtgagatgagggactaccaaatccgaggtcttaactggatgattgacctgtatgaa
aatggcattaatggtatcttagccgatgagatgggtctcggaaagaccctgcagaccata
gctcttttaggttacatgaagacttaccgaaacatccctggaccccacatggtcattgta
cccaaatccacattacgtaactgggagaatgagttcaagaggtggtgcccatctctacgt
gctgtctgtttaattggtgaccaggagaccagatctactttcattcgtgaagtcatgatg
cctggggaatgggatgtttgcatcacctcctatgagatgtgtatcagagagaaatcagtc
ttcaagaaatttaattggaggtacatggtaattgatgaggctcatcgtatcaagaatgaa
aagagcaagctctcagaaattgtccgtgaatttcgttcaaccaatcgcctgctgctgact
ggtacacccctgcaaaacaacctccatgaactgtggtcactgttgaacttcttgctccca
gaagtcttcagctcttctgaggatttcgatgcttggttcaacactaacaactgtctggga
gatcaaactttggttgaacgtctgcatactgtcttgcgtcccttcctgctccgtaggttg
aagtctgatgtcgaaaaacgcctgcttcccaaaaaagaaaccaagatttacatccagctt
tcaaaaatgcaacgtgattggtacacaaagattttaatgaaggatattgacattgtgaat
ggtgctgggcgcactgagaaaatgcgtctgcaaaatatcctcatgcagttgcggaagtgt
tgcaaccacccttacctcttcgatggtgctgagcctggtccaccttatactactgactac
cacttggttgaaaacgctggtaagatggttgttctagataagttactcccaaaacttcaa
gaaatggggtcccgtgtcctcctcttctctcagatgacacgtatgttggacatcctcgaa
gattattccgtgtggcgtaaatattcatactgccgtattgatggtcagacagctcacgaa
gacagacagaggcagatcgacgacttcaattcacctgactcagataagttcttgttcatg
ttgtcaactcgcgccggaggtttgggtattaacttagcaactgctgacattgtaatcctc
tttgattcagattggaacccacaaatggatttacaggctatggacagagcccatcgtatt
ggtcaaaagaaacaagtcaaagtcttccgttttattcaagaaaattccatggaagtaaag
ttggtggaacgtgcagaagtcaagttgcgtcttgataagatggttattcagcaaggtcga
ttaatagataacaagaccaataccctggcaaaggatgaaatgttggctatgatcaggcat
ggtgccaatgaagtatttaaaggaaaggatgatgagtttactgatgaggatattgattcc
atcattggtagaggagagatcaagacagaagaactgaacaagaagcttgaaagccttgga
gaatcctccttgaggcagttcactcttgacgttcctactaattcagtttatcaatttgaa
ggtgaagattacagaaataagcagaaggcaattgttggtatgtggatcgagccaccaaag
agggagagaaaagccaactatgctgttgatgcctacttcagagaggccctcagagtctca
gaaccaaaggcccctaaggcgcctcgtcctcctaaacagcctgttgttcaagacttccag
ttcttccctccaaggcttttcgagctcttggacaaagaaatctactattacagaaagact
gtcagctacaaggtgcccaaaaatcctgagtacatggctgatgctggtcgtattcagaag
gaagagcaaaggaaaattgatgaagctgagccggtgacagaagaagaaatggaagagaga
gataacctcctcacccaagggttccttaactggagtaagagagattttaaccagttcatc
aaagccaatgaaaagtttggtcgtgatgacattgaaaatattgcgaaggaggtcgagggc
aaaacacctgaagaggtgatggaatactctgctgtgttctgggagcgctgctcagaactg
caagactgtgaccgaatcttggcacagatagagagaggcgaggcaaaaatccagcgaaga
gcttccatcaagaaagccttggatgctaagatggctaggtatagagcacctttccatcag
ttgagaatatcttacggcaccaacaaaggaaagaactatactgaagaagaggaccggttc
ttggtctgtatgctgcataagctaggttttgacaaagaaaatgtatatgaagagctaagg
gcagctgttaggtcagctcctcagttcagatttgattggttcatcaaaagcagaactgct
ttggaacttcagcgtcgctgcaacacattgattacattgattgagagagaaaaccaagag
ctggaagaaaaggaacgtgctgagagaaagaagggaaggcccaagggtgctctatatgta
aaatctggaaagcgggctgctggttctcaagatggccgtggtagaagaaagaagaaagta
gagtag
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integrated database retrieval system
