Macrobrachium nipponense (oriental river prawn): 135203018
Help
Entry
135203018 CDS
T09903
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135203018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnz03021
]
135203018
03041 Spliceosome [BR:
mnz03041
]
135203018
03036 Chromosome and associated proteins [BR:
mnz03036
]
135203018
Transcription machinery [BR:
mnz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
135203018
Spliceosome [BR:
mnz03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
135203018
Complex B
135203018
Complex C
U2 SnRNP specific factors
135203018
Chromosome and associated proteins [BR:
mnz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
135203018
TFTC complex
135203018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
WDR55
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
135203018
NCBI-ProteinID:
XP_064088656
LinkDB
All DBs
Position
33:complement(22403645..22451715)
Genome browser
AA seq
1217 aa
AA seq
DB search
MYLYNLTLQRASGITHAVHGNFSGTRTQELVVSRGRSLELLRPDPNTGKVHTILTTDIFG
IIRSLMAFRLTGGNKDYVVVGSDSGRITILEYSQAKNQFERIHMETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAVEKQKLVYILNRDAAARLTISSPLEAHKSNTLVYHTVGVDVGFENP
LFACLEIDYEEADTDPTGEAIHRTQQTLTFYELDLGLNHVVRKYHEPLEEHANFLISVPG
GNDGPSGVLVCSENYITYKNLGDQPDIRCPIPRRRNDLDDPERGMIFICAATHKTRSMFF
FLAQTEQGDIFKITLETDEDVVTEIKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFYAPRQLQNLVLVDELDSLSPIMACQIADLANEDT
PQLYTVCGRGPRSSLRVLRHGLEVSEMAVSELPGNPTAVWTVRKRSEDLYDSYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLACSQLGDDALVQIYPDGIRHIRADRRVNEWKAPG
KKTIVRCALNQRQVVIALTGGEIVYFEMDPSGQLNEYTERKEMKSDVICMGIGRVPLGEQ
RSQFLAVGLSDNTVRIISLDPNDCLTVRGMQALPALPESLSIIEMGGQEGSDNEPRTLGA
LYLNIGLQNGVLLRTVLDSVTGDMSDTRTRYLGSRPVKLFRIIMQGNEAVLAMSSRSWLS
YYYQNRFHLTPLSYESLEYAAGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSHPLE
YTPRKFVIHQESGHLVVIETDHNAYTEETKRQRKMQMAEELREAAGEEEAEVAERMAEAL
LSEDLPDAVFGSPKAGPGMWASLIRIIEPIQGNTLHTIRLDQNEAAFSISLVKFANQSDM
DQQFLLVGTVKDYQLSPRQVECGYIYCYRVVGECTSLELVHRTEVEDIPTALCPYNGRVL
VGVGRLLRIYDLGKKKLLRKCENKHIPNLIVDIKARGQRVFVSDVQESLFVLRYKRHENQ
LIIFTDDTNQRWVTTSCLLDYDTASVADKFGNIAVVRLGNDINDDVDEDPTGNKALWDRG
LLNGASQKTEVVANFHVGETVNTLEKATLIPGGSESLVYTTLSGTVGVLVPFTSREDHEL
FQNLEMHMRTEHPPLCGRDHLSFRSYFFPVKNVIDGDLCEQFNMVDAGKQRNIAEELDKT
PNELSKRLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgtacaatttaacactgcagcgtgcctcaggcataacgcatgcagtgcatggc
aatttctctggaaccagaacacaagaacttgttgtgtcgagaggacgatcgttagaactt
ttgaggcctgatccaaatacaggaaaggttcacacaatactgacaactgatatttttgga
attatccgttctttaatggcttttcggctgacaggtggaaataaagattatgttgttgtt
gggtcagattctggccgcattaccatcctggaatacagccaggccaagaatcagttcgag
aggattcacatggaaacctttgggaagagtggatgccgccggattgtcccaggccagtac
cttgctatcgatccaaaagggagagctgtgatgattggtgctgtagaaaaacagaagctg
gtctacattttgaacagagatgctgctgcacgtttaacaatttcgtccccattagaggct
cacaagagtaatactctagtgtatcacactgttggagttgatgttggatttgaaaaccct
ctgtttgcttgtctggaaattgactatgaggaggcagacacagaccctactggagaggcc
attcatcgaacacagcagactctcacgttttatgaattggatcttggtctgaatcacgta
gtgagaaagtaccatgagcctcttgaagaacatgcaaactttctgatctctgtcccagga
ggtaatgatggtccctctggtgtgttagtttgttcagaaaattatatcacctacaagaat
ctgggtgatcagcctgatatccgatgccccattccaaggaggagaaatgacttggacgat
cctgagagaggtatgattttcatatgtgctgcaactcataagactaggtccatgttcttt
ttcctggcccagacagagcaaggagatatttttaagatcactctggagacagatgaagat
gttgtaactgagatcaagttgaagtatttcgatactgtccctcctgcaacagccatgtgt
gttttgaagactgggttcttgtttgtggcctcagaatttggaaatcattacctttatcag
attgctcatcttggtgatgatgatgatgaaccagagtttagctctgccatgccactggaa
gagggtgacacattcttctacgctccgaggcaattgcagaatttagttcttgtcgatgaa
cttgattctctctctccaattatggcatgtcagattgctgatttagcaaatgaggacacc
ccacagttatacacagtctgcggccgtggacccagatcatcattgcgagtactccgtcat
ggtttggaagttagtgagatggcagtttcagaactgccaggtaaccccacagctgtctgg
actgttagaaaaagaagtgaagatttgtacgattcgtatatcattgtgtctttcgtcaat
gccaccctggtactgagcattggtgaaactgtagaggaagtgacggattcaggtttcctt
ggaacaacaccaacacttgcttgttcacaacttggtgatgacgctttggttcagatttat
ccagatggtatccgacacatccgtgctgatcgtcgtgttaatgaatggaaggctcctggc
aagaagaccatcgtcagatgtgcactgaaccagcgacaggttgtcattgctctgactggc
ggagagattgtctactttgaaatggatccaagtggtcaactgaatgaatacacagaaaga
aaggagatgaagagtgacgtcatctgtatgggcattggccgtgtacctttgggtgagcag
aggtcacagttcttggcagtcggcctctctgataacactgtccgaatcatcagcttggac
cccaatgattgtctgacagtcagaggaatgcaagctttgccagcccttccagagtccttg
agtatcattgagatgggagggcaagagggctctgataacgagccacgaacacttggagct
ctttatctcaacattggattgcagaatggagtattgttaaggactgttctagactctgtc
actggtgatatgtcagacactcgtactcgttatttgggttccagaccagttaaacttttc
aggattatcatgcagggaaatgaggctgtacttgccatgtcgtcccgatcgtggctttcg
tattactaccagaacagatttcatctgactcctctgtcttatgaaagtcttgagtatgct
gcgggtttctcatctgaacagtgtcctgagggtattgtagccatttcaaccaacacactg
agaattttagctcttgaaaaactgggtgctgtgttcaaccaggtttctcatccacttgaa
tacacgccccgcaagtttgtcattcaccaggaaagtggacatctagttgtcattgagact
gaccacaatgcctacactgaagaaaccaagagacagaggaagatgcagatggcagaggaa
cttcgagaagcagctggagaggaagaagctgaagttgcagaaagaatggcagaggctctc
ctgtctgaagatttgccagatgctgtgtttggctcgccaaaagctggacccgggatgtgg
gcatctcttatacgcatcattgaaccaattcagggtaatacactccacaccatcagactg
gaccagaatgaggcagcttttagcatttcccttgtgaagtttgccaaccagagtgacatg
gatcaacagttcctcctagttggaacagtcaaagattatcagctcagtcctcgtcaggtt
gagtgtggatacatatactgctacagggtggttggagaatgcacaagcttagaactcgtt
catcgtactgaggtggaagacataccgactgccttgtgcccttataatggcagagtttta
gtgggtgttggccggcttctaagaatttatgacttggggaagaaaaaactgctgcgcaag
tgtgaaaataagcacataccaaacttgattgttgacattaaagctcgtggtcaaagagtt
tttgtcagtgacgtccaggagagcctgtttgtgctgcgctacaagagacacgagaaccaa
ctcattatatttacggatgacacaaaccagcgttgggtcacaacgtcttgtctgttggat
tatgatactgcttcagttgccgataaatttggcaacattgctgtggtccgcttagggaac
gacataaatgatgatgtagatgaagatccaacaggaaacaaagccctctgggatagaggg
ttattgaatggagcctcccagaagactgaagttgtggctaatttccatgtgggagagact
gtgaatactctggagaaagcaactttgattcctggaggcagtgaatctctcgtatacaca
acgctcagtggaaccgttggagtcctcgtacctttcacgtcccgagaagatcacgagtta
ttccaaaatcttgagatgcacatgagaacggaacaccctcctttgtgtggccgagaccac
ctttcctttagatcatatttcttccctgtcaagaatgttattgacggagatctctgtgaa
cagttcaacatggtggatgctggcaagcagaggaacatcgccgaagaactggacaagaca
ccaaacgaactgtcaaaacggctggaagatataagaacgagatatgccttttga
DBGET
integrated database retrieval system
