Macrobrachium nipponense (oriental river prawn): 135203224
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Entry
135203224 CDS
T09903
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein 26-like
KO
K13192
RNA-binding protein 26
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mnz01009
]
135203224
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135203224
03041 Spliceosome [BR:
mnz03041
]
135203224
Protein phosphatases and associated proteins [BR:
mnz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135203224
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
135203224
Spliceosome [BR:
mnz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
135203224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup35_RRM_2
RRM_Nup35
RRM_1
PWI
Motif
Other DBs
NCBI-GeneID:
135203224
NCBI-ProteinID:
XP_064089054
LinkDB
All DBs
Position
33:60263717..60495291
Genome browser
AA seq
1074 aa
AA seq
DB search
MNCIHIVFLTDFLLWNRCDADPEALAKYCLALVRKDRVLAELRASMIEQLDVFLQSNTKS
FVDKFLQVTTSRSYIPKGSAPTASSSSSFTPESLSSSTNNTGDNGPPPLPPMPVTKQACG
NSPDSTTPPNAVPLPATSGSCIIMHPTPPPLPPSSTIVPPPPPPPESAPPPPIPASVIVR
KEEVSSSQRSRKSDSDRDRDERRGRRRSPSRGRSRSKSRSRSRSRDRLRRSRSRGRAGRS
RYEDRRRRSPPNKRYRRSRTRSRTRSPRRSRSPRRSRSRERRSRSRNRSRSLSPGNRRTR
GRSPRSSSPLRKSKSIPKDEKRDSPLHNSPSTDVRVEPRSESNTVIQSVVAKHPDFQTPV
SAKKQRCRDYDEKGYCMRRXYNLCPYDHGSDPVVLEGIGGVMDFPPPPVPGGGLGSTGYS
PASDASQGVPNPRQPPMRHMQYGEYTPRDPSLWGGQPSSSGGPYYTGGQGRGAGSVGLRF
SAPPPPIPTGSARELISVPVNNGSLIETSVRPSLAKRLGPAVPSSHVPSSMSVRPEIDNC
TLELRKIPPGLNTISHLNDHFAKFGTIVNIQVHYENDPESALVTFTSHSEANAAYRSTEA
VLNNRFIRLYWHNSQSKGDRQGSYSTFTGRPSHDKMTIRHPNKTLNNIVDPEDKTEKVIL
SGGSLVKTVYNTHALHSAVAANASTVSPTVKSVTSSTQVTSISSALATTQSPALSAADTK
KQEIDAILKQRELLAAEVAAKQKVEKQKAEALKLKSEVEQRKKQLIDKQVQQMKVLVNKL
DTNKSTMSVAEKKLLMETIKSLQGAVETTRSQIVGSDLPKTKTQVDREVLDTELELYSVQ
AEGGDITRLRNRLNQLKAQQKAVGFPSRTRASPYSLGRGVYSGTRGRGMTVVRGAAVRGR
GRGRGTRGFGYYSSSVDRRTTKIHASGFEREDKEEVLAHFSSLGSVTNYVWDDQTPAVTI
QYSARREAEKAMVEGRTLGDRLLTLTWSFEAALPPRTQATATGVIGNKHVSTHTFTSVTP
HSTTPLLSPEDTLEEITEEIVEEVEAEEGETQNMFEEEEEEVEDDEEEVRSWRR
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgaattgtatacatatagtgtttctaacagacttcttgttatggaacaggtgtgatgct
gatccagaggctctagcaaagtactgcctagcattggtccgcaaagaccgtgtgcttgct
gagcttagagcaagcatgattgaacaacttgatgtgtttcttcagtcaaatacgaagtct
tttgtggataagttcttacaagtaacgacgtctcggtcttacatacctaaaggctcggct
ccaactgcttcctcatctagttctttcacacctgaatcattgtcatcaagtacaaacaat
actggtgataatggaccaccaccattacctccaatgcctgtgacaaagcaggcttgtgga
aattcaccagattcaactactccaccaaatgctgtccctttacctgcaacgtctgggtct
tgtatcataatgcatcccacaccaccacctctgccaccaagttcaactattgttcctcca
cctccaccacctcctgagtctgctccaccaccgccaattccggcctctgtgatagttcgt
aaagaagaggtgtcttcctctcagcgatcaagaaaatctgactcggatcgagaccgggat
gaaagaaggggtcgacgtaggtctccatcccggggaaggtctaggtcaaaatctcgatca
agatcacgaagtagggataggttgagaaggtcaagatccagaggacgtgccggccgtagc
agatatgaagacagaagacgtagatcaccgccaaataaaagatacagacgttctagaacg
cgctcccggacaaggagtcctaggcgatcaagaagtccacgtagatctaggtctcgagaa
agacgttcacggtcaagaaacaggtctcgctctctcagcccaggaaataggagaactcgt
gggcgatccccaaggtcatccagccctctgcggaagtcaaaatccattccaaaagatgag
aagcgtgatagtcctttgcataattctccatccactgatgtgagggttgaaccacggtct
gaaagtaatacggtcattcaaagtgttgttgctaaacatcctgactttcagactcctgtt
tctgcaaagaagcaaagatgtagagattatgatgaaaaaggttattgtatgcggaggtga
tataacttgtgtccatatgaccatggctctgacccagtagtacttgagggaattggagga
gtgatggattttccaccacctcctgtgcctggtggaggtcttggctctacaggatattct
ccagcctctgatgcatctcagggagtgccgaatcctagacagccacccatgcgacacatg
cagtacggtgaatatacacctcgtgatcctagtttatggggtggtcagccaagtagttca
ggtggaccctactacactggaggacaaggaaggggtgctggttctgtaggtttaagattc
agtgccccaccacctcccatacccactggatctgccagagaactaatcagtgttccagtt
aataatgggagccttatagagactagtgttcgcccctccctggctaaaagattgggacct
gcagtaccttcatcacatgtaccatcctctatgtcagtacgacctgaaattgacaattgc
actctagaattgaggaagattcctcctggcttaaacaccatctctcacctgaatgaccat
tttgctaaatttggtacaattgttaatattcaggtacattatgaaaatgacccagagtcg
gccttagttacatttacaagccactctgaagccaatgcagcatatagaagtacagaagca
gttctcaacaacagattcataagactgtattggcacaattcacagagcaaaggcgatcgt
caagggtcttactccacttttacaggaagaccatctcatgataaaatgaccattcgtcat
cctaataaaacattaaacaatattgtcgatcctgaagataagactgagaaggtcatacta
tctggtggaagtctagtcaaaactgtctacaatacacatgccctccattcagctgttgct
gccaatgcaagcacagtctcccctacagtaaaatctgtcacatctagtactcaagtaaca
tcaatctcttctgctcttgccactactcagagccctgcattatcagctgcagacactaag
aagcaggaaattgatgccattctcaaacaaagggaactcctggctgctgaggtcgctgca
aagcagaaagttgagaaacagaaagcagaggcattgaagcttaaatctgaggttgaacag
agaaagaagcaacttattgataaacaagttcagcagatgaaggttttggttaataaactg
gataccaacaaatctaccatgtctgtggcagaaaaaaagctgctaatggagaccatcaag
tctcttcaaggtgcagtagaaactacccggtcacagatagtaggtagtgacttgcccaaa
acaaagactcaggttgaccgagaggttcttgacaccgaattggaactttattccgttcaa
gctgagggaggcgacattaccaggctccgaaatcgtctcaatcagttgaaggcacagcag
aaggcagtcggatttccttctcgtacaagggctagtccctatagtttaggaaggggtgtt
tacagtggaacacgtggtcgtggaatgactgtggttaggggggctgctgtcagaggaaga
ggtagaggtaggggaacaagaggatttggttactactcctcttcagttgacagaaggaca
accaaaatacatgcttctggctttgaacgagaagataaagaggaggttcttgctcacttt
tctagcttgggatcagtgactaactatgtgtgggatgaccagaccccagcagtaacaatc
caatattctgctagaagagaagctgagaaggcaatggttgagggcagaacgttaggagac
cgtctgttgacgttgacctggtcctttgaagctgccctcccacctcgtacacaggccact
gcaactggggtaataggaaataagcatgtgtccactcacacctttaccagtgttacccct
cactctactacccccttactctctccagaagatactttggaggaaatcacagaggaaatt
gtagaagaagtggaggcagaggagggagaaacacaaaacatgtttgaagaggaagaagaa
gaagttgaagatgacgaggaagaagttaggtcatggagaaggtag
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