Macrobrachium nipponense (oriental river prawn): 135203574
Help
Entry
135203574 CDS
T09903
Name
(RefSeq) beta-1-syntrophin-like isoform X1
KO
K24064
beta-syntrophin
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135203574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PDZ
PH_17
PH
PDZ_6
PDZ_2
AI2M-like_HNH
YIEGIA_cap
Motif
Other DBs
NCBI-GeneID:
135203574
NCBI-ProteinID:
XP_064089395
LinkDB
All DBs
Position
36:39988170..40192375
Genome browser
AA seq
492 aa
AA seq
DB search
MGEKVGNLEVLVGGNWHAARLTLEGDLLFVTLTDLDDVNAQGSDGEAGPSDVPEPIASQK
RVVQICKSDNNGLGISIKGGRENKMPILISKIFKGMAADLTEDLYVGDAILSVNGEDLKE
ATHDEAVRALKRAGKVVTLEVIPSFYVTVKYLREVTPYFRKASVMADIGWELQTGFLGAE
NGFLNSGEDRSSPVMSNGPDTRSIPLLFCHLTRSFKCQESSSLELHSPDRLHSLIMKCSS
ESDTSGWYNALHSTLDRLTTSALTHANKMLGDVLDKATIHHIGWLKLKLDQGKEEWEPQF
CAVTDHDMILFQEVPWTKEAWANPLVFYPLLATRIVNSTHKGSLGGSEPITMTMRCGTQE
GVCCSVFQHDTQRDLATWVKVLVQGAHSAVKRQKEVACYCEWRGVEAKLVLHHEDGFTLL
STHDSSGSRGRVLWTQPFHKLIMSSDDGARLIWLRFDGDMEVELDLKTNPKPFVFILHTF
LSAKVHQQSLTS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgggggagaaggtgggtaacttggaggtccttgtggggggtaattggcatgcggctcgt
ctaaccctcgagggcgacctgctttttgtcaccctcactgacctagatgatgtcaatgcg
cagggatctgatggtgaggctggacctagcgatgtccctgagccaattgcaagccagaag
agagttgtccagatttgcaagtctgacaacaatggcttgggtatttcaattaaaggaggt
cgggaaaacaaaatgccaattcttatctccaagatatttaagggaatggcagctgatttg
actgaggatttgtatgtaggtgatgcaattctttcggtgaatggggaagatctcaaggag
gccactcatgatgaagcagtgagagctctgaagcgtgcaggaaaagttgtcacacttgaa
gttattccttcattttatgttacagttaaatatctgcgtgaagtcacaccttatttccga
aaggcttcagtaatggcggacattggttgggaactccagactggatttttgggtgctgaa
aatggttttctaaacagtggagaagatcgtagttcacctgttatgtcaaatggccctgat
acacggtctattcccctgctcttctgtcacctaacaagaagctttaaatgtcaagagtcc
agcagtctcgaattacattcaccggaccgacttcacagcttaataatgaagtgttcatca
gaatcagatacttctggctggtacaatgctctccactccactttagatagactcacgacg
tcagctctcactcatgcgaacaaaatgttgggagatgtcctggataaagccacaattcat
catattggttggctaaagttaaaacttgatcagggtaaagaggaatgggaaccacaattt
tgtgcagtaaccgatcatgatatgattctctttcaagaagtaccctggactaaagaagca
tgggctaaccctcttgttttctatccacttttagccacaagaattgtaaactctacacac
aaaggttccctcggaggtagtgaacctatcacaatgactatgcgttgtggtacccaagaa
ggagtgtgttgcagtgtttttcagcatgacacacaacgggacctggctacttgggtgaag
gtgctagttcagggtgcacatagtgcagttaaaagacagaaggaagttgcttgttattgt
gagtggcgaggagtagaggcaaaattggtgttacatcatgaagatggatttactttgctg
tcgacacatgactctagcggcagcagaggcagagtgttatggacacagcctttccacaag
ttgatcatgagttctgatgatggcgcccgcctaatttggctgagatttgatggagacatg
gaagtggagcttgatttgaagaccaatccaaaaccctttgtcttcatcttgcatacattt
ttatcagcaaaagtacatcagcaatctctaacctcctga
DBGET
integrated database retrieval system
