Macrobrachium nipponense (oriental river prawn): 135203588
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Entry
135203588 CDS
T09903
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135203588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnz03021
]
135203588
03036 Chromosome and associated proteins [BR:
mnz03036
]
135203588
Transcription machinery [BR:
mnz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135203588
Chromosome and associated proteins [BR:
mnz03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135203588
PBAF complex
135203588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
135203588
NCBI-ProteinID:
XP_064089436
LinkDB
All DBs
Position
36:complement(43795662..43944629)
Genome browser
AA seq
731 aa
AA seq
DB search
MSLPTNYRQVAMMGAAPTPGPTHVYMPGSTMMSNILKATTTSSSSTSPGNGGTGSTKDRL
ARTPNTPSSSSKGVGEANVPSPFSSSHLGNPAFNPQKMGTGKGGVSKQSGEGRIPKPPKA
PDKPLMPYMRYSRKVWDQVKAANNDLKLWEIGKIIGSMWRDLPEADKQDYVDEYETEKLE
YEKAMKTYHASPSYQAYLNAKTKGFYHPAGTAAVEEKEVLDRSSSSTAVGTKLDRRIDIQ
PAEDEDDYDDGLSVKHVSHARYVRNHRLINEIFSDTVVPDVRSVVTSQRLTVLRRQVQSL
TMHQKKLETELQQIEEKFEAKKRKFVEAGDSFQGELKKVKAMAPKLDEASFAAMVERQKE
VLRREAEERQRSAQGLPVRPPSASSQGGSANNPSNREDSSEAAGPAPQNTATPVEASSSP
APMQENDMGGEDDSKMEASNVTSTAASSTPSSAAPTTTTTAATAAVNGPTSAAASPTDQP
APAVIPSSMAPAVRTVPQQNLPAAAPANTAPSLPPMAPHPSVSSHPNVASHPGVPPYSNV
ATAPGIPTGAPHPSGPTHPTGPSLPGGAPHPGGAPHPGGLLILPGLLILLGFLILAERLF
QVEHLTHQELLKQQQLLTPQEPFTKRGSHTHQVSHIQQSLIQLLLLILVGTLQEHCIQWE
LPMLEVLTKEHLRILQVVLLMQEDLLTLQVLLMVAPHTLQALHTLQVLLTLDSPTLQGHL
SLPVCPILLLL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgcccacgaattatcggcaagtggccatgatgggtgcagcgccgacacctggc
ccaacacatgtttacatgcctgggtccaccatgatgagcaacattttgaaagccaccacg
acctcatcttcctccacctctcctgggaatggaggcacagggagtaccaaagatcggttg
gctcgtactccaaacactccatcatcgtcctcaaagggtgtaggtgaagccaatgtgcca
agtccattttcttcgtcacacctaggaaaccctgcctttaaccctcagaaaatgggtaca
ggcaagggaggggtgagtaagcaaagcggcgaagggcgaatcccgaaaccaccaaaagct
cctgacaagccattgatgccctacatgagatactctcgcaaggtttgggaccaagttaaa
gctgcgaacaatgatttgaaattatgggaaattggcaaaattattggatccatgtggcga
gaccttcctgaagcagacaaacaggattacgttgatgaatatgagacagagaagcttgag
tatgaaaaggctatgaaaacatatcatgcttcgccaagttatcaggcatacttgaatgcc
aaaacaaaggggttttaccacccagcaggaacggcagcagtggaagagaaggaagtccta
gaccgctcatccagctctacagctgtgggtaccaaacttgacagacgtattgatatccaa
cctgcagaagatgaggatgattatgatgatggattaagtgttaaacatgtttctcatgca
aggtatgtacgcaatcatcgcttgatcaatgaaatatttagtgacacagtggttccagat
gtgaggtctgtagtgacaagccagcgtcttactgttctgcgtcgacaagtccagtcttta
acaatgcatcagaaaaaactggaaactgaattgcaacagattgaggaaaagtttgaggct
aaaaagagaaagtttgttgaagcaggggatagttttcaaggtgaattaaagaaagttaag
gctatggctcccaagttagacgaggcatcatttgctgctatggttgaacgtcagaaagaa
gtattacgaagggaagctgaggagagacaaaggagtgcccagggtcttcctgtgcgaccc
ccttcagcatcttcccaaggaggatctgctaacaatccttcaaatcgtgaggatagcagt
gaagctgcaggacctgctcctcagaatactgctacaccagttgaagcctcctcttcacca
gcacccatgcaggagaatgacatgggcggagaggatgatagcaagatggaagcctccaat
gtgacgtctacagctgcctcatctacaccaagtagtgcagcccctaccactaccacaact
gctgcaactgcagctgtcaatggacccacctctgctgctgcctcacccactgaccaacct
gctcctgcagtcatcccaagcagcatggcacctgcagtccgcactgtaccacagcagaat
ctgccagctgcagctcctgccaacacagctccctctcttcctcccatggctcctcatccc
tctgtcagttctcaccctaatgtagccagtcatcctggtgttcctccctattccaatgtt
gccacagctcctggtatccctacaggtgcccctcatccttcagggcctacgcatcccaca
gggccttctcttcctggtggggctcctcatcctggtggggctcctcatcctggtgggctc
ctcatcctgccggggctcctcatcctgctggggttcctcatcctggcggaacgcctcttc
caagtggagcacctcacccatcaggaactcctcaaacaacagcaactcctcaccccacag
gagcccttcaccaaacggggcagccacacccatcaggtgtcccacattcagcagtccctc
atccaactgctgctcctcatcctggtgggcacactacaggagcactgcattcagtgggag
ttgcccatgctggaggtcctcaccaaggagcaccttcgcatcctgcaagtggtcctcctc
atgcaggaggaccttctcacccttcaggtcctcctcatggtggccccccacacccttcag
gctctccatactctgcaggtcctcctcaccctggactcccccaccctgcagggacacctc
tcccttccggtttgccccatccttctgctcctgtag
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