Macrobrachium nipponense (oriental river prawn): 135204338
Help
Entry
135204338 CDS
T09903
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup93-like
KO
K14309
nuclear pore complex protein Nup93
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135204338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135204338
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135204338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nucleopor_Nup85
Vps39_1
Motif
Other DBs
NCBI-GeneID:
135204338
NCBI-ProteinID:
XP_064090598
LinkDB
All DBs
Position
44:49415713..49728421
Genome browser
AA seq
876 aa
AA seq
DB search
MSGRNLQELLQQAEHLASNLNGGGDLPRVDRSLQQILHTGQQLWSRPTAPGTTESDAQAR
GNWVVSFSSANMKKKRGTGRGQKGLYVLTYTTSTYGKGSYTEAILLGSRGIDLPHISTRL
DDLVTAKTLQPLEAVADTDIAAFLRNERENAIITAVEDSKRRTCEEVDKLYWKQQQAEWE
QRKQHLLSAFTHTGTDLLNITVQQQESIVTIPRTVGGVASNLSSEETAYVRVIQQYNEEV
LQGGIRPNLPEALNNAASALGDQGITDLWALVQCLTEVPVSIGGDAAQARASPKVQAALV
RQARGFLEKSYANYMNTIVYSHLERAQLGGVPGLVPXVRAYLDVVLPAQAISTLEDGLAG
GAPVWPLIFYCMRAGGGKALHQALADNSSPSVVEVLNALEHYEKSDSGRLPPDLEKKLRM
SYKRSVKNSSDPFKRAVYCILSHCDPHEDHADIATTTDDYLWVKLCVVDCDSSPSASTSS
SSSAIQDTLSLNQLQNLLYEQYGEAHFNAWQQPLLYTSLLLMTGQFEAAIEFLSRKEALR
CHAVHIALALHEMNLLALPAQVQAPVLSREDNDPEGVRRLNLTRLILLYTRKFEATDPCE
ALHYCFFLRSLKGKNGENVFSSCISQLVLQSREFDLLLGRLEPDGRRTPGVIDKFKVDVS
EVTEMVAQDSEKKGLYEDAVKLYDLAKNHEKVVALLNQLLSQVVHQTESGSGSQRGRVLE
LATAVALRFKTHGHNSLPHNAATLHLLLDLSTFFELYHKERFNDALEVLKRLHVIALRTD
EVETRVNGMSSYGSEVRNVLPHVLLAAMTTTHRLYCSPPVQSSPQTSFNTSALPLSPAFK
HLKEQARAIVTFAGMIPMRLHSEINARLVQLEALIN
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcggaatttacaagagctgttgcagcaggcagaacaccttgctagcaacttg
aatggcgggggagatctgccacgtgttgatcgctctttgcagcagattctccacacaggc
caacagctctggtctcgcccaactgccccaggaacgacagagagtgatgcccaagcacgg
ggcaactgggtcgtttctttctcatccgcaaatatgaaaaagaagagagggactggcaga
gggcaaaagggcctctacgtattaacatacacaacgtccacttatggaaaaggttcttat
acagaagccatccttttgggttctcgagggatagacctgcctcacatatccacgcggttg
gacgacctcgtgacagccaagactctccagcctctagaagccgttgcggacacagacatc
gcagccttcctcaggaatgagagagaaaatgccattattacggccgtcgaggattccaaa
agaaggacatgtgaagaagttgataagctctactggaagcaacagcaagccgaatgggaa
cagagaaaacagcacctcctctcagctttcacacacacgggaacagacctcctgaatatc
actgttcaacagcaggaaagcatagtgactattcctcgaactgttggtggtgtcgccagt
aatctcagcagtgaggaaacagcttatgtaagagtcattcaacagtataatgaggaagtt
ctccagggaggtatacgacctaaccttcctgaagcccttaacaatgctgcttcagctctg
ggagaccagggaatcacagatttgtgggccttggtgcaatgtctaactgaagttccagta
agcattggtggagatgctgcccaggcaagagcttcacctaaagttcaggcagcccttgtt
agacaagcacgaggctttttggaaaagagctatgccaactacatgaatactattgtatat
tcgcatttggagcgtgctcagctgggaggagtgccaggtctagttcccntggtgcgtgcc
tatttggacgttgttctgcctgcacaggcgatttcaacacttgaagatggactagcaggt
ggtgcacctgtttggcccttaattttttactgcatgagagctggaggaggaaaagctctt
caccaggcactagctgataatagttcaccatctgttgtagaggttttaaatgcccttgag
cattatgaaaagagtgactctggacgtttaccccctgaccttgagaagaaattgagaatg
tcctacaaaagatctgtcaaaaattcctcagatccatttaagcgtgctgtatattgcatt
ttaagccactgtgatccccatgaagatcatgctgatattgctaccactaccgacgattac
ctttgggtgaagctttgtgtggtggattgtgattcatctccctcagcctcaacatcaagt
agtagcagtgctattcaagacactctgtctctgaatcaacttcagaaccttttatatgaa
caatatggagaagctcatttcaatgcatggcaacaaccactgctctacacttctctgcta
cttatgactggccaatttgaagctgccattgagttcttgagtcgtaaggaagctcttcga
tgtcatgcagttcacatagctctggcattacatgaaatgaatttattagcattacctgct
caggttcaggctccagttttgtcccgtgaagacaatgatccagaaggagttcgtagattg
aatttaacaagactcattttactctacactcgtaagttcgaggcaacagatccatgtgaa
gctctacattactgcttcttcttaagatctttaaaaggcaaaaatggtgaaaatgtgttc
tccagttgcataagtcagctggttttgcagtctcgagaatttgatctgctccttggaagg
ctggaaccagatggccgccgaactcctggtgttattgataagtttaaggttgatgtgagt
gaggtaacagaaatggttgcacaagattcagaaaagaagggtctatatgaagatgctgtt
aagttgtacgatttggccaaaaatcatgaaaaggttgtggccctgttgaatcagttacta
agccaagtggtgcaccaaaccgagagtggaagtggcagtcaaaggggaagagtattagaa
ctggcaacagcagtagctttgcgtttcaagacacacggccataactcactcccccataat
gctgctactcttcatttattgttagatcttagcacatttttcgagctttaccacaaggaa
agatttaatgatgcattagaggttttgaaaaggttacatgtcatagcactaagaacagat
gaagtggagactagagtcaacggcatgtcttcgtatggtagcgaagttcgtaatgtgtta
ccacatgtgcttttagctgctatgaccaccactcatcgcttgtattgctcccctccagtc
cagtcatctccacagacatcttttaatacttcagcattgcctttatcaccggcattcaag
cacttaaaggaacaagcacgggcgattgtgacgtttgcagggatgatcccaatgaggctt
cattctgaaattaatgcaagactggtacaactggaagctttgataaattaa
DBGET
integrated database retrieval system
