Macrobrachium nipponense (oriental river prawn): 135204339
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Entry
135204339 CDS
T09903
Name
(RefSeq) probable small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135204339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135204339
03041 Spliceosome [BR:
mnz03041
]
135204339
03032 DNA replication proteins [BR:
mnz03032
]
135204339
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
135204339
Spliceosome [BR:
mnz03041
]
Complex A
U1 snRNP components
Sm proteins
135204339
U2 snRNP components
135204339
Complex B
U1 snRNP components
135204339
U4/U6.U5 tri-snRNP components
135204339
Complex C
U2 snRNP components
135204339
DNA replication proteins [BR:
mnz03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
135204339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
135204339
NCBI-ProteinID:
XP_064090599
LinkDB
All DBs
Position
44:49142294..49157250
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AA seq
96 aa
AA seq
DB search
MSYAQKSKVQKVMVLPINLIFRYLQSRARVQVWLYENQNLRIEGHIIGFDEYMNVMLDAA
EEVHIKKGTRKNIGRILLKGDNITLIQNTQPDGSNM
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacgcgcagaagtccaaggtgcagaaggtgatggtgttgcccatcaacttgatt
tttaggtatcttcagtctagagctagagttcaggtgtggctgtacgagaaccaaaaccta
cgcatagaagggcacatcattggatttgatgaatacatgaatgttatgttagatgctgca
gaggaagtacatatcaagaaaggaacaaggaaaaatattgggcgaattctcctaaagggt
gacaatataacattgatccagaatacacaacctgatggaagtaacatgtag
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