Macrobrachium nipponense (oriental river prawn): 135205010
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Entry
135205010 CDS
T09903
Name
(RefSeq) LOW QUALITY PROTEIN: BLOC-2 complex member HPS3-like
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnz04131
]
135205010
Membrane trafficking [BR:
mnz04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
135205010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_N
HPS3_C
Motif
Other DBs
NCBI-GeneID:
135205010
NCBI-ProteinID:
XP_064091314
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All DBs
Position
48:6348223..6516021
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AA seq
1115 aa
AA seq
DB search
MMSAKMVRVISVHHFTRQDVAGLERAGGRGVARGKGDILLIGGEHRVDIRDLKNGATLQG
SFPTVDLVQQLVYCATGNYVCTLETKPARHGGDHRYVRVYLHWDQDSTNQPMRARIAGRV
TPSSQSGILNLEMIEIPLRKPAEFVACCQTTGNIAVACGITVTIHKFFQKTHDISKLKFI
DFEEIIELDMSFIVKEVAISEDVVGCVSESEAHIFQVILNPHLLKSTSEEKEVKVQEKRS
KSRSKSKTRSASRSPGRSTDSCSSAGRYRGRWSSQKEEATSSVIRNADDYTDLSELTWVP
TLSYGRKRPVDDKRFLLFPSLVGAAHCGPVAEPGEVIGPVSSSRCSSVRVKLLSASTTPQ
KMPPNIFEAVTLIHRRADHTNDPDIPFTNLQMTAVYGSEAAKKNNSSTPRRSSHPLLPAT
AIPKVGASVFLTTPHVGQLYHITLADGGFGTNVVRGGVFSYTAPVYTVALEPSLLHALTL
TGLETYTLRPHPHVVVSHLPEDLDMVVPPHWEETVCLVGLRPFLNVETLTLTDGCLALIA
ANNEGGDKSHTVYSLHLPSAASLYKEMVRVGRSHRSASPSTYLHLLLEAHLVLTTAIHFE
LPTVEEAEEDLYALLQDSSALLGDYYAQCTNEAEWKQATQYYQVSSLSPDAVIERLDPQC
PGLVSVVTDLLLHPSTPVLTSAQANCVLEMLEKVAPEKVSTIILKSKCLKDYKKDKVLAI
IKQELSTTSEPRPADVLALALVFLDRGSPEQVATVLASLRAYQLVVVLLKHSNLLLVTED
GATRLSPLAQVLAEHKKEVFTEVFVSLIGDGTLSLNAFVDAFVAVYPIVSCGPECNMHSL
WLRDFLEKFFLEYAHNPEITDHRERYDRAVTVLVSLYLASLMGAFGDKSKEDPNWSDQRA
ALKELYAPRPTFLNLLPPFNMETSLEKGIDKAEGEDKGQGAESKEDLSSTLLHLLVLQSL
LSSELPSLEDRANVLKFVKTNPTAVGAQSLHLLCLEPLQQMEYMLDHFPLILLQYGKDVY
DTPIEWVDLVSALINHKAGLPSSDPPHQVYSDVLNDVLSELVATSPLDVFLRIIPSTHHE
ELRNSIRQCHSAALATYLRSSLITYANNLLAQMAK
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgcgaaaatggtaagagtgatctctgtccaccacttcactcggcaagatgtg
gccggactggagagagctggagggcgtggtgtcgcaagggggaagggggacatcctcttg
attgggggagagcaccgcgtagacataagagacttgaagaatggtgctacactccagggc
agcttcccgactgtcgatttggtgcaacagttagtgtattgtgcaacagggaactatgtt
tgtaccctggaaaccaagccagcaagacacggaggtgatcatcgctacgtcagagtctat
ctgcactgggatcaagatagcacaaaccagcccatgagggcacgcatagccggccgggtc
acgccgagcagccagtcgggcattctcaacctcgagatgatcgagataccgttgaggaaa
cctgcagaattcgttgcctgttgtcagacgacgggcaacatagccgtggcctgcggaatc
accgtaacgattcacaagtttttccagaagacccacgacatatccaagttgaagttcata
gattttgaggagatcatcgaactggacatgtcattcatagtcaaagaagttgccatttcc
gaggacgtggtcgggtgcgtttcagagtctgaggcccacatattccaggtgattttgaat
ccccatcttttaaagtcaacctctgaggagaaggaagttaaggttcaggagaaacgaagc
aagtctaggtccaagtcaaagactcgttctgcttcgaggtcacccggccgtagcacagac
tcgtgcagctctgctgggagatatagaggtcgatggtctagccagaaagaggaggctact
agttctgtcatcaggaatgcagacgattacaccgatctctccgagttaacttgggtacca
acactttcctatggcagaaaacgaccggtcgatgacaagcgttttctattgttcccctct
ctggtgggggccgctcactgcggaccagtagcggagcctggagaagttataggccctgtt
agctcctcccgctgctcaagtgttcgtgtgaagttgctgagcgccagcacgactccgcag
aagatgccaccgaacattttcgaagctgtgacgttgattcatcgtcgggctgaccacacc
aacgaccctgacatcccctttacgaatttacagatgacggctgtgtatgggtcagaagca
gcgaaaaagaataacagctcaacacctcgtagatcatcacatcctctcttgcctgcaaca
gccattccaaaagtcggagcctctgtgttcctcaccactcctcacgtcggtcagctgtac
cacattactctggctgatggtggttttggaaccaacgtagtgagaggcggcgtgttctct
tacactgcgcctgtttatacagtagcattggagccgtcactcttgcacgcccttaccttg
actgggttggaaacatacaccttgagaccacatccacatgttgtggtgtcccatcttcca
gaggaccttgatatggttgtaccaccacactgggaagagacggtgtgtttggtcggcctg
agaccgttccttaatgtggagaccttgactttgactgacgggtgtttggcccttattgct
gccaataatgagggtggcgacaagtcccacaccgtctattccttgcatctgccaagcgct
gctagcctatacaaagaaatggtgcgcgtcgggaggagccacaggtctgcctctccgtcg
acttacctccaccttctgctggaggcccatctggtcctgacaacggcaattcatttcgag
ttgccaacagtcgaggaagctgaggaggatctctatgctttgctacaggactcttctgcc
ctgcttggggattactatgcacaatgcacaaatgaagcagaatggaagcaggcaacacag
tattaccaggtgtcgagtctaagccccgacgcggtgatagagcgtcttgatccccagtgt
cctggtcttgtctccgttgttactgacctgcttctccatccaagcactcctgtgttgacg
tcggctcaggcaaactgtgtcttggagatgctggagaaagtggctccagagaaagtgtcg
acaataattctgaagtccaagtgtctgaaggattacaagaaggataaggtcttggcgatt
atcaagcaggaactttcaacaacgtccgaacctcgccctgcagatgtcctggcgttggcc
ctggtttttcttgatcgtggttcaccagagcaggttgcaaccgtgctggcgtcattgcgc
gcttaccagctagtggtggttttgttgaagcattccaaccttctcctcgtcacagaagat
ggagcaacacgtctttctcctcttgctcaggtgctagctgaacacaagaaggaagtgttc
acggaggtttttgtctcactcattggagacgggacgctgtccttgaacgctttcgtagat
gctttcgtagctgtgtaccctatcgtttcgtgtggcccagagtgtaacatgcactctctc
tggctgcgagacttcctggagaagttctttttggagtatgcgcataaccctgagatcaca
gaccacagagagcggtatgaccgggcagtaactgtccttgtcagtttgtacctagcaagt
ctaatgggagcctttggggataaatctaaggaagacccaaactggagcgaccagcgtgca
gccctgaaggagctctacgccccgcgtcccaccttcctgaacctcctgcctccgttcaac
atggagacgtcccttgagaaggggatcgacaaagccgagggtgaagacaagggacagggg
gccgagagcaaggaggatttgtcatcaacattgctgcatcttcttgttttgcaatcacta
ctgagctcagagctgccctccctcgaagacagggccaatgtccttaagttcgtcaagaca
aaccccactgccgtaggagcccagtcccttcacttactctgcctggaaccactccagcag
atggagtacatgcttgatcacttcccgcttattctactccagtatggcaaggacgtatat
gacacaccgatcgagtgggtggatttggtgtccgctctgatcaatcacaaagcaggtctg
ccctcaagcgacccaccacatcaagtctattcggatgttttgaatgacgtgttgagcgaa
ctagtagccacgtctcctctggacgtgttcctccgaataattcccagcacccaccacgag
gagttgcggaactccattcgacagtgccactccgctgcattggccacctatctgcgttca
tcattgataacatacgcaaacaacttgttggcgcagatggccaagtaa
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