Macrobrachium nipponense (oriental river prawn): 135205623
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Entry
135205623 CDS
T09903
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(III) chain-like
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
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GFIT
Motif
Pfam:
MamL-1
CCSAP
Motif
Other DBs
NCBI-GeneID:
135205623
NCBI-ProteinID:
XP_064092486
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All DBs
Position
24:52195399..52259600
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AA seq
1347 aa
AA seq
DB search
MADHFQQGKQIVVDRLKRRLGQYRQNHNSVVSRYDTSIDTLYTDQKNQTLLLKQRHIESK
AKKSNKKSADNKKQENPASLLTTMGQSKMLARGHDQTTSSGESHENEPATKKQRLNNGAP
PPSMGGPHGASSHGGSAPPPPPPPHGGGPQTHAGASQATAPGRDITDFQMVQQLSNIKKT
DSPVPPGAGAIGATTSASNGPPVDDIKKEQQDLDMALLDGIEDFSNIEDIADMGINFDQF
IQDLDFDNIKPENPGTVLSEYVKEESVDLFENNPSSVSSDSGVASGNTNAQSPQVALSKP
SGTSTTAASPVFSQYPGTPPVSHTSTPPTSFTPTSFNATSTPSTSGSPTQFSTTSSVPKI
RPGMNMNMTQSDMIPAAQTLKHMAEQHQIKMSSTGTNNVHPNFQDYGMNSMNNPAAAAAG
MMGQTGGVNNQMYPNSMNQSSPVYSNQNNINELELKKRQMLQQQMAQQQQQQQQQQQQQQ
QQQXQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPSQQPTSQPQQQPGAQ
QQAQMPGGMVGYQNRMSPMGSFPNTSQPNALTPQQYQMSGAMGGVVRGAYPGGPRGPSPI
PPGSQGGPSPMGAGQMGAQMGTENKMGNEMFYQSQMGGQYPIQGQPQRYPGQQMIGPGGM
MRHVSPANQMMGQASQMMSRPPPPDYPQVALMHRSQMMGQPMPQTMGQMGQGMVSYQGMR
SGMRPGMVSAPMVNMGSNQMMAGMAQQTLPPNMPTMKPGPGMVPTTSMNPSASMPSSTIT
GATMPTVTVNTMSAGNMTNSMGQAGSGSAIGMVGRASMGAGNMMQRPRPPNVNIGPGGLN
ISTQMPPSRPEWRQIMMQGNQSNMIINMRAGYPQQQPQQAGMMTQGSQLMGMQRPSNQMM
NMMAMQQGPGMQPGPNMQAGPGMQAGPGMQAGPGMQAGPGMQAGPGMQAGPGMQAGPGMQ
VGPGMQAGTGMQAGPGMQAGPGMQANPGMQTNPNMQGAPRLQNAAAMQGTPRMQANMVGM
TQQGQAKSAKIRQTTLSSVKKVRMGMQMSQAGGMGGAQVTSQYPGQQQQMTGIAQMPPGA
NQMMGNAAAQGRNPAAMAGMTGARSPVAMAQMSGTGHPMSPANRGQMGGASPVSMGQMSG
SGQAPSPVSMGGMSHPRSPATVGQVHPRSPATLGQGGPARPLSNPGMGQGGPARPLSNPG
MTQQQGQQSSQVAAAAAMAGQPPGSNAGQLNRGSPGSLTQNPGGGPASRPGQSPMNQVQP
IQGPVNSVSQPNMNINRAKGVPTTVNNGPNAPPATTVASQRPNSDANNVRTSQPSTPNPP
PTSTGSAAPTTDFLDFEFGEFAQLIND
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccacttccagcaaggcaagcaaattgttgtagatcggttgaaacgtcgcctt
ggacagtatcgccagaaccataattctgtagtcagtcgttatgacacatctatagacact
ttgtatacggaccaaaagaatcaaacgttattactaaagcaaagacatattgaatctaag
gccaagaagagtaataagaaatctgctgacaacaaaaagcaggagaatcctgcatccctg
ttaacaaccatggggcaatcaaagatgcttgcccgagggcatgatcagaccacatcatct
ggcgagtctcatgaaaatgagccggcaacaaagaagcagaggcttaataatggtgcccca
ccaccttccatgggtggccctcatggtgcctcaagtcatggtggttctgcaccaccacca
cctcctcctcctcatggtggtgggcctcaaactcatgctggggcatcccaggcaactgca
cctggaagggatattacagacttccaaatggtgcaacagttatctaatattaaaaagacg
gactcccctgttcctcctggggctggggcaataggtgccactacctcggcttctaatggc
ccccctgttgacgatattaagaaagaacaacaggatcttgatatggctttacttgatggc
atcgaagattttagtaacattgaggacatagctgatatgggaataaattttgatcagttt
attcaagatttagattttgataatataaaaccagaaaatcctgggacagttttaagtgaa
tatgtaaaagaggaatctgtagacttatttgaaaacaatccatctagtgttagcagtgac
agcggtgtcgcaagtggtaatacaaatgcccaaagcccccaagttgcattaagtaaacct
agtggcacatccactacagcggcttcaccagtgttttcacagtacccaggcactcctcca
gtatctcatacctcgaccccccctacctctttcacaccaacctcatttaatgccacgtcc
actccaagtacatcgggatccccaacacagttttccacaacaagcagtgtgccaaaaata
cgtcccggtatgaatatgaacatgacccagtccgacatgattcccgctgctcaaaccttg
aagcacatggctgagcaacatcagatcaagatgtcctccacggggacgaataacgttcat
cccaatttccaagattatgggatgaacagtatgaacaatcctgctgctgctgctgcaggc
atgatgggtcagacaggtggtgtgaataatcaaatgtacccaaatagcatgaatcaaagt
agtcctgtgtatagtaatcaaaacaatattaatgagctcgaattgaaaaagcggcagatg
ttacagcagcaaatggctcagcaacaacagcagcagcagcaacagcaacaacaacaacag
cagcagcagncgcagcagcagcagcaacagcaacaacaacagcaacagcagcagcagcaa
cagcaacagcaacaacagcagcagcagcaacaacagcagcagcagcagcagcagcagcaa
cagcaacaacaaccctcacagcagcctacttctcagccgcaacaacaaccaggtgcacaa
cagcaggcacagatgcctgggggaatggttggataccagaaccgcatgtcacccatggga
tcttttcccaatacttctcagccaaatgcactcactccgcagcaataccagatgtctgga
gctatgggtggtgtagtaagaggggcttaccctggtggtcctcgtggaccatcgcctatt
ccaccaggctcacaaggaggaccttcgccaatgggtgctggccagatgggtgcacaaatg
ggtactgaaaataagatgggaaatgaaatgttttatcagagccaaatgggtggccagtat
ccaattcaagggcaaccgcaacgctatccaggacagcagatgataggtcctggtggcatg
atgcgacatgttagtccagctaatcagatgatgggacaggccagtcaaatgatgtcccgg
ccacctccacctgattaccctcaagttgcccttatgcataggtctcagatgatgggtcag
cccatgcctcaaaccatgggtcagatgggccagggaatggtgagttatcaaggtatgcga
tcaggaatgagaccaggaatggttagtgctcccatggtaaatatgggatccaaccagatg
atggctggtatggcccagcaaacattacccccaaatatgcctaccatgaaacctgggcct
ggtatggtgcctaccacatccatgaatccatctgcttctatgccaagtagtacaattaca
ggtgctactatgcctacagtgacagtgaacaccatgtcagcaggcaacatgaccaatagc
atggggcaggcaggtagcggaagtgcgataggcatggttggacgggcatctatgggagca
ggaaatatgatgcagaggccaagacccccgaatgtaaatattggtccgggtggtttgaac
attagtacgcagatgccgccgtcgaggcccgagtggcgacaaatcatgatgcagggcaac
cagagtaacatgattataaacatgagagctggttaccctcagcagcagccacagcaagca
gggatgatgacacaaggaagtcagctcatggggatgcagcggccttcaaatcaaatgatg
aatatgatggctatgcaacagggacctggtatgcagccaggtcctaatatgcaggctggg
ccaggtatgcaggccgggcctggcatgcaggctgggccgggcatgcaggctgggccgggc
atgcaggccgggccgggcatgcaggccgggcctggcatgcaggctggccctggcatgcaa
gtaggcccaggtatgcaagctggaacaggtatgcaagctggacctggtatgcaagctgga
cctggtatgcaggccaatcctggtatgcagaccaatccaaatatgcaaggggcaccaaga
ttacaaaatgctgctgcaatgcagggaacgcccagaatgcaggccaatatggttggcatg
acacagcaaggccaggcaaaatcagccaagatacgacagacaactctttcaagtgtcaaa
aaggtacggatgggtatgcagatgagccaagctggtggcatgggtggtgcacaggtgacg
tcccagtaccctgggcagcaacaacaaatgactggcattgctcaaatgcctcctggcgca
aatcagatgatgggtaatgcagctgcccaagggagaaacccagcagcaatggctggtatg
actggtgctcgaagcccagttgccatggctcagatgagtggaactgggcatccaatgagc
cctgctaacagaggtcaaatgggaggtgcaagtcctgtaagtatgggtcagatgagtggc
tcaggacaagctcccagccctgttagcatgggaggtatgtcacaccctagatccccagca
actgtgggtcaagtgcacccacgtagtccagctaccctgggacaaggtggaccagctaga
cctttaagtaatcctggaatgggtcaaggaggaccagcaagacctctgagcaatccaggt
atgacccagcagcaaggccagcagtcttcacaggtggcagctgcagctgccatggcaggc
caaccacctggaagtaatgccggacaattaaacagaggttcaccaggtagtttaactcaa
aatcctggtggtggccctgcatctcgtcctggtcagagcccaatgaaccaagtgcagcct
attcagggtccagttaatagtgtatcgcaacctaacatgaacataaatagggctaaaggt
gtcccaacgacagtgaacaatggtcctaatgctcctcctgcaacaacagtggctagccag
cgtccaaacagtgatgctaataatgtacggacatcacaaccttcaacaccaaacccgccc
cctacttcaacaggaagtgcagcccctaccactgactttcttgattttgaatttggtgaa
tttgcccaacttattaatgactaa
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