Macrobrachium nipponense (oriental river prawn): 135205764
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Entry
135205764 CDS
T09903
Name
(RefSeq) replication factor C subunit 5-like isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03030
DNA replication
mnz03410
Base excision repair
mnz03420
Nucleotide excision repair
mnz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135205764
03410 Base excision repair
135205764
03420 Nucleotide excision repair
135205764
03430 Mismatch repair
135205764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnz03032
]
135205764
03036 Chromosome and associated proteins [BR:
mnz03036
]
135205764
03400 DNA repair and recombination proteins [BR:
mnz03400
]
135205764
DNA replication proteins [BR:
mnz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
135205764
DNA Replication Termination Factors
ELG1-RFC complex
135205764
Chromosome and associated proteins [BR:
mnz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
135205764
DNA repair and recombination proteins [BR:
mnz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
135205764
Check point factors
HRAD17(Rad24)-RFC complex
135205764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_11
AAA_22
AAA_24
RuvB_N
AAA_assoc_2
ResIII
AAA_14
AAA_16
RCF1-5-like_lid
DEAD
DUF815
AAA_7
AAA_5
PhoH
AAA_30
AAA_19
Sigma54_activ_2
Mg_chelatase
BrkDBD
TIP49
Thioredoxin_6
bpMoxR
ABC_tran
ATPase_2
Motif
Other DBs
NCBI-GeneID:
135205764
NCBI-ProteinID:
XP_064092974
LinkDB
All DBs
Position
24:69050147..69081271
Genome browser
AA seq
333 aa
AA seq
DB search
MGIQDKERSENLPWVEKYRPSTLQELVSHEDIIATIKKFIEEDHLPHLLFYGPPGTGKTS
TILACARQLYSPKEFTSMVLECNASDDRGIGVVRQQILSFASTRTIFKSGFKLIILDEAD
AMTNDAQNALRRIIEKFTDNCRFCFICNYLGKIIPAIQSRCTRFRFGPLSPTQIVPRLDY
VIEKENVKVTEDGKKALLALSGGDMRRVLNILQSTSMAYDEVNEDNVYTCVGHPLRSDIT
NMINWMLNERFDTAYKNVMHLKTTKGLALQDILTEFHLYIHRIDFPVEVRIHLMEKLSDI
EVRVADGASEKIQLSAVLAAFTQAKKMIADKAT
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcaagataaggaacgatcggagaacctgccttgggtggaaaaatacaggcca
agtacactacaggagcttgtttcacatgaagacatcatagctactataaagaagtttatc
gaagaggaccatcttccacatctactgttttatggcccaccaggtacagggaagacttct
actattctagcttgtgctcggcagttatattcacccaaagagttcacatctatggtatta
gagtgcaatgcatcagatgatcgaggtattggtgttgttcgacaacagatcctcagtttt
gctagtacacgcaccatatttaagtctggattcaagctgattattctagatgaagcagat
gctatgaccaatgatgcacaaaatgctctcagaagaatcattgaaaaattcactgataat
tgccggttttgcttcatctgcaactacctgggtaaaattatacctgctattcagtccagg
tgtacacgattcagatttgggccactgtctccaactcagattgttccaagacttgattat
gtcattgagaaagaaaatgtaaaagtaactgaagatggtaaaaaggccttactggcactc
tcagggggagatatgaggagagttctcaatattcttcagtcgacatcaatggcatatgat
gaggtgaatgaagacaatgtttatacatgtgtaggtcatcctcttcgctcagatataaca
aatatgatcaactggatgttgaatgaaagatttgacacagcctacaaaaacgtgatgcat
cttaaaacaacaaagggacttgctctacaggacattctgacagagtttcatctgtacatt
catagaattgatttcccagttgaggtacgcattcacctgatggaaaaactttccgatata
gaggttagagtagctgatggagcatcagaaaaaatccagttgtcagcagttttagcagcc
ttcacacaagctaaaaaaatgattgccgacaaagccacttga
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