Macrobrachium nipponense (oriental river prawn): 135206609
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Entry
135206609 CDS
T09903
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135206609
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mnz01009
]
135206609
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135206609
03036 Chromosome and associated proteins [BR:
mnz03036
]
135206609
Protein phosphatases and associated proteins [BR:
mnz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
135206609
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
135206609
Chromosome and associated proteins [BR:
mnz03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
135206609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WDR55
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
135206609
NCBI-ProteinID:
XP_064094016
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All DBs
Position
31:6108073..6273700
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AA seq
464 aa
AA seq
DB search
MVAQVLKMEDPESDDSTEETEEGNGGEIQWCFSQVKGTLDDDVSEADIISCVEFNHDGDL
LATGDKGGRVVIFQRDPSSKSCHPRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL
KRKNPAHFLLSTNDKTIKLWKVSERDKRAEGYNLRDESGQIRDPTSLTSLRVPVLKPMEL
MVEASPRRIFANAHTYHINSISINSDQETYLSADDLRINLWHMEVTDQSFNIVDIKPTNM
EELTEVITASEFHPHDCNVFVYSSSKGTIRLCDMRQAALCDSHSKMFEEPEDPTSRSFFS
EIISSISDVKFSNSGRYMISRDYLSVKVWDLHMETKPIETYPVHEYLRSKLCSLYENDCI
FDKFECCWSGNDSAIMTGSYNNFFRMFDRTTKRDVTLEASRDTAKPRTLLKPRKVCTAGK
RKKDEISVDCLDFNKKILHTAWHPHENIIAVAATNNLYIFQDKF
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggttgctcaggtgttgaaaatggaagacccggaatccgacgacagtacagaagaaacc
gaagagggcaatggaggagagatccaatggtgcttctctcaagtcaagggaactctcgac
gacgacgtgagtgaagcggacattatatcctgcgtggaatttaatcatgatggtgacttg
ctggcaacaggtgataaaggaggcagagttgttatctttcagcgggatccctcatccaag
agttgtcacccaagacgtggggagtataatgtctacagcacttttcaaagtcacgagcca
gagtttgactaccttaaatcgttagaaatagaagaaaagattaataaaattagatggctc
aagaggaaaaaccctgcacattttttactctctacaaatgataaaacaattaaattatgg
aaagtgtcagagagagataagcgtgcagaaggctataacttgcgggatgagtccggccaa
attagggacccaacttcactcacttctctacgggtacctgtgctgaaacctatggaatta
atggttgaagcatctcctcggcgaatatttgccaatgcccacacctatcacataaattcc
atctcaataaattcagatcaggagacatatttatcggctgatgaccttcgtatcaattta
tggcatatggaagtcactgatcagtccttcaacatagttgatatcaaacctacaaatatg
gaagagctgacagaggtaatcactgcatcagaattccatccccatgactgcaatgtgttt
gtttattctagcagcaaaggaaccattcggctgtgcgacatgcgacaggccgctctctgt
gatagtcactctaagatgtttgaggagcccgaagatccgacgagccgtagtttcttcagt
gaaataatatcctctattagtgatgttaagttttctaacagtggtcgctatatgatttca
cgagattacttgtctgttaaagtttgggatcttcacatggaaactaaacccattgaaact
tatccggtgcatgaatatcttcgctccaaactatgttcgctatatgagaatgattgcatt
ttcgataagtttgaatgttgttggagtggaaatgattctgccatcatgactggctcatac
aataacttctttaggatgtttgatagaaccactaagagagatgttacactggaagcatca
agagatacagccaaacctagaacattattaaaaccaagaaaggtttgtactgcgggaaaa
cggaagaaggatgagatcagtgttgattgcctcgatttcaataagaagatattacacacg
gcatggcatccacatgaaaatatcatagcagttgcagccaccaacaatctttacatattc
caagacaaattttag
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