Macrobrachium nipponense (oriental river prawn): 135206978
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Entry
135206978 CDS
T09903
Name
(RefSeq) protein SEC13 homolog isoform X1
KO
K14004
protein transport protein SEC13
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03013
Nucleocytoplasmic transport
mnz04141
Protein processing in endoplasmic reticulum
mnz04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135206978
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135206978
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
135206978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135206978
04131 Membrane trafficking [BR:
mnz04131
]
135206978
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135206978
Membrane trafficking [BR:
mnz04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
135206978
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
135206978
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
135206978
BRITE hierarchy
Motif
Pfam:
WD40
ANAPC4_WD40
Rax2
IKI3
Motif
Other DBs
NCBI-GeneID:
135206978
NCBI-ProteinID:
XP_064094606
LinkDB
All DBs
Position
31:complement(55116106..55136774)
Genome browser
AA seq
311 aa
AA seq
DB search
MVSVISNVVTGHDDMIHDAQMDYYGTRLATCSSDRSVKIFEVKGTTHTLIADLREHEGPV
WQVAWAHPVFGNILASCSYDRKVIIWQEDGHKWKKIYEYANHDSSVNSVCWAPHEYGMIL
ACASSDGSVSVLSYVSDTWESKKITNAHSIGCNAVSWAPAVASGSADGSNNRTGGPVQRL
VTGGCDTYVKVWRLEASGEWVEEFKLEGHSDWVRDVAWAPSIGLSRSVIASCSQDRRVII
WVNDSTTGVWHHRELNTFDDVIWHVSWSVTGNILAVSGGDNKVSLWKETLEGEWVCLNDS
AAVQNAEQRTL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggtatcggttataagcaatgtagtaacgggtcatgatgacatgatccatgatgcccaa
atggattattatggaacccgattagctacatgttcgtctgaccgctctgtcaaaatcttt
gaagttaaaggtacaactcatacactgatagcagatctcagggaacatgaaggaccagta
tggcaggttgcatgggcacatccagtttttggtaacatcttggcatcatgcagctatgac
cggaaagtgatcatatggcaagaagatggtcacaaatggaaaaaaatatatgaatatgct
aatcatgattcttcagtgaatagtgtatgctgggcaccacatgaatatggaatgattttg
gcatgtgcatcttccgacggctctgtttctgtcttgtcttatgtttcggacacgtgggaa
tccaaaaagatcaccaatgctcattctattggttgcaatgctgtcagctgggctcctgca
gtggcatcgggttctgctgacgggtccaataatagaactggaggacctgttcaacgtctg
gtaacaggtggatgtgatacatatgtcaaggtctggaggttagaagcttcaggagaatgg
gttgaggaattcaagctagaaggccattctgattgggtgcgtgatgttgcttgggctccg
tctattggcctctcacgttctgttattgcttcatgttcccaggatagacgagttataatt
tgggtgaacgatagtacaacgggggtatggcaccacagagaactgaatacttttgatgac
gtcatttggcatgttagctggtctgtaactggaaacattttagctgtctcaggtggagat
aataaggtcagcctgtggaaggaaactcttgaaggtgaatgggtatgcttgaacgactct
gctgctgttcaaaatgccgaacaacgtactttgtaa
DBGET
integrated database retrieval system