Macrobrachium nipponense (oriental river prawn): 135207214
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Entry
135207214 CDS
T09903
Name
(RefSeq) HEAT repeat-containing protein 1-like
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
135207214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mnz03009
]
135207214
Ribosome biogenesis [BR:
mnz03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
135207214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_HEATR1
BP28CT
Motif
Other DBs
NCBI-GeneID:
135207214
NCBI-ProteinID:
XP_064094895
LinkDB
All DBs
Position
32:complement(11423866..11757832)
Genome browser
AA seq
1325 aa
AA seq
DB search
MEGQDLSEGHLLLLLKATKGAFEIEQFGSAGIKIRNRIMACVLKDCLKNIEMQYNFLAMI
WGWQSFLPQSDIVDKPLMAWCLNLGSSLLDIQEGNLAWMLNSAFPLVPSLVLGITNSSVG
VRKGALMVMGKIAAIKGGRLGENNHSLLLEKVLQHSEEILADDRQLLMCLYEFSEADPSR
WFHVLQSILGVLTDNVPVHIKMGLLYALSSIQDIAVLRCLLPLAGKILLQAESCLHDAKV
DVADSYTLYYILLQFSPKTSKILEEKEGWNFFVKALTCSKNVMRIMDEWVSPQKILMEQV
MTQKFFASIEKENLQASLWSHLIGCVVESEDATIASRLRSGLRKTSLDAEFIVKEIENLN
LATKVTSMRDAQAKRIKQKKTQKEYSIELQNWKKLGLMLETIGVMSSLGHPWLLTKVLCE
CLHQTLNLDSVITEAVQQQILSALLHLLQKSKEELGAETSKNVKLNVELIVQCIRSSVSP
DTHRRAMLILSLVADIFPDVVLHNMMSIFTFMGTSLLRRDDSYSFQVIHQTIENIVPVLI
KCESGSEELQFKLANVCQVFFDAFPDLPEHRRLPLFIQLASTIGVKENLWILLGLMADSH
VMRGNVLETPESTEEVRRSVPHIIEFALMLSTEFSVLHQVNACYKLLEYISKLPEDIESL
VQKQKVGKVKKKPLDIINWESHSTKQYINFKYISIALLSHLLSSEKFVGKVLEGSEGMEE
ELRDTYQLLLEKTMSYLRTVTDSCERNKDKPSGKVWLSLQRKIVDVLDGIISVLPPNLLL
QVVDGLLESPIPLVRCRATELLCSKLQPSSTFFSKEDLLDLLPFVDILRKVGADDQEPIE
NRQVGIYALQLLTKHLAPHVKIGAIEPVMSTAVQLVCSQGTPMKVVTQALLLIAEAVGSL
KAHAVNHLGSLMPVIARLLVKCDTESDHLALAAATATHKIIENMAQFLSPHLETLICSIC
HLCALKDEAFIQESRLGLRLAAMRDSLPQRIEPRLMIPKFAAAYKTLSGDEIPALQPLMI
MVETLITKAESKVVVAQKPAFIDLFTQALDLRTQKGDHQSIDAVEANVCSALAKLLLRLN
EHDNVAVFANLQSWASDVVDIKPSRLITFYRFANHLAETLKVLFIKAKLADNLFGQAASV
LERNNSVNSLNTVFGAGEEAAQKTAVLLKYVLDTLKTIFLHDSVKFTNQERFQMMLHPLI
NQLENTKIGKETYKDMITHHFIPCVLKFTSAVGDDSLWKELNRAILLKLRNDDDDPLVIL
AALETFEALIDAFGEDYLQPLLADIMPYITEVFETVDPEIEAATKEIYTKMEAILGDSFR
SYLDR
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcaagatctaagtgaaggacatctgctactgctgctgaaagcaaccaaagga
gcatttgaaattgaacagtttgggtcagcaggaattaaaataaggaacagaattatggct
tgtgttctcaaggattgcttgaagaacattgaaatgcagtacaacttcttagccatgata
tggggatggcagtcgtttctccctcagtcagacattgttgataaacctcttatggcttgg
tgcttgaatcttggatcatctctcttagatatccaggaaggaaatttagcttggatgctg
aattcagctttcccattagtaccatccctggtgttagggattacaaactccagtgttggg
gtgagaaaaggagctttaatggtcatgggaaagattgctgctatcaaaggtgggagactg
ggtgaaaataatcatagtcttctacttgagaaagttctgcagcattctgaagaaattttg
gcagatgacaggcagctgcttatgtgcttatatgagtttagtgaagcagatccgtcaagg
tggttccatgttttgcagtcaatattaggagtgctgactgataatgttcctgtgcatata
aagatgggacttctgtatgctctttcaagtattcaagatattgctgtgcttcgttgtctt
ctgcctctggctggaaagatattgcttcaggctgaatcttgtcttcatgatgcaaaagtt
gatgttgctgattcatatactctctattatatattactgcaattttcgcctaaaacttca
aagattttggaagagaaagaaggctggaatttctttgtgaaagcactgacatgttcaaaa
aatgttatgagaatcatggatgaatgggtttcaccacagaaaattttaatggaacaggtg
atgacccagaaattctttgctagtattgaaaaagagaatttacaggcttctctttggagc
catcttattgggtgtgtagtagaatcagaagatgccactatagcttccagactccgaagt
ggacttcgcaagactagtttagatgctgagtttattgtaaaagaaattgagaatttaaat
cttgcaacaaaagttacttctatgcgggatgcacaagctaagaggatcaaacaaaagaag
actcaaaaagaatattcaattgaactacaaaattggaaaaagttaggcttgatgctggag
acaattggtgtaatgtcatcgttaggtcatccgtggttattgaccaaagtgttatgcgag
tgtctccaccagactttaaatttggactctgttattacggaagcagtccagcagcagata
ttatcagcacttctacatttgcttcagaaatcaaaggaggaattaggcgcagaaacaagt
aagaacgtgaagttgaatgtggagttgattgtacaatgcatacgttcttcagtcagccct
gatacccatcgtcgtgcaatgctgattctatctttagttgctgatattttcccagatgtt
gttttacataatatgatgtccatcttcacttttatggggacttctcttcttaggcgggat
gattcctattcatttcaagtcatccatcaaactatagaaaacatcgtccctgtgctgata
aagtgtgaaagtgggtcggaggagttgcagttcaaacttgccaatgtatgccaggtattt
ttcgatgcatttcctgaccttccagagcaccgccgtttgcctctatttattcagcttgcc
agtacaattggtgtcaaagaaaacttatggattttactaggcctaatggctgattctcat
gttatgagaggtaatgttttggaaacacctgaaagcacagaggaagttcgtcgcagcgtg
ccgcacattatagagtttgctttgatgctgagcactgaatttagtgttctccatcaggtt
aatgcttgttataagcttttggaatacatcagtaaattacctgaggatattgaaagtctc
gtgcagaaacagaaagtgggaaaagttaaaaagaaacctttggacataataaattgggaa
tctcactctacaaagcagtatatcaacttcaagtacataagcatagctcttttgtcacac
cttttgtcatcagagaagtttgtgggaaaggtgttagaaggatcggagggtatggaagaa
gaactgcgtgacacttaccagctccttctagagaagacgatgtcctatcttcgcactgtt
actgattcttgtgaaaggaacaaggataagcctagtggtaaggtgtggttatctcttcaa
aggaaaattgttgatgttttagatggaattatatcagtgctacctccaaacttgttgctc
caagttgttgatggacttttagaatcccccattcctcttgttcgatgcagagccacagag
ctactgtgttcaaagctacaacctagctctacattcttcagcaaagaagatttactggat
ttgcttccatttgttgacattttgagaaaagtaggagcagatgatcaagagccaattgag
aatcgacaggttgggatttatgctctgcaacttctcactaaacacttggcaccgcatgtt
aagattggtgctattgaacctgttatgtcaactgctgttcaactagtttgcagtcaaggt
actccgatgaaggttgtaactcaagcattgctactgatagcagaggctgttggatccctg
aaggctcatgctgtaaaccatcttggatccttaatgcctgtgattgccagacttcttgtt
aagtgtgacacagaatcagatcatcttgctttggcagcagctacagcaactcataagata
attgaaaacatggcacagttcttgtctccacatctagaaacacttatttgttccatatgt
catctttgtgccttgaaagatgaagctttcattcaagaatcccggttaggtctgaggtta
gctgctatgcgagatagtctaccacagcgtatcgaaccaagacttatgatacccaaattt
gctgcagcctacaagactttgtcaggtgatgaaattcctgctctacaaccattgatgatt
atggtggaaacacttataaccaaagcagaaagtaaggttgtggttgcccaaaaacctgct
ttcattgacttatttactcaagcattagaccttcgcactcaaaagggtgatcatcaaagc
attgatgctgtggaggcgaatgtttgttcagccttagccaaactgcttttgcgtttgaat
gaacatgacaacgttgctgtttttgctaacttgcagtcctgggcttcagatgttgtggat
attaaaccttccagactcataacattttataggttcgcaaatcacctcgctgaaactctg
aaggtacttttcatcaaggccaaattagctgataacttattcggtcaggccgcctcagtt
ctggagagaaacaactcggttaatagcctgaatacagtatttggtgcaggagaggaagct
gcacaaaaaacagctgttcttctgaagtatgtcttagatactctgaagactattttcctt
catgattctgtaaaatttacaaatcaggaacgcttccaaatgatgttgcatcctttgatc
aatcagctggagaataccaagattggcaaggagacatataaagatatgatcacccaccac
ttcatcccctgtgtcttgaaattcacctctgcagttggcgatgattcactctggaaagaa
ctgaaccgagcaattctgttgaaacttcgaaatgatgatgatgatcctcttgtgatctta
gcagcactggaaacttttgaagccctaattgatgcctttggtgaagattacttacagcct
cttcttgctgacataatgccatacataacagaagtatttgaaacagtagatcctgaaata
gaagctgccacaaaagaaatttacacaaaaatggaagccatattaggcgattcgttcagg
tcttatcttgacagataa
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