KEGG   Macrobrachium nipponense (oriental river prawn): 135207486
Entry
135207486         CDS       T09903                                 
Name
(RefSeq) general transcription factor IIH subunit 3-like isoform X1
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
mnz  Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03022  Basal transcription factors
mnz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mnz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    135207486
  09124 Replication and repair
   03420 Nucleotide excision repair
    135207486
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mnz03021]
    135207486
   03400 DNA repair and recombination proteins [BR:mnz03400]
    135207486
Transcription machinery [BR:mnz03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     135207486
DNA repair and recombination proteins [BR:mnz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     135207486
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 135207486
NCBI-ProteinID: XP_064095347
LinkDB
Position
32:42972026..42995891
AA seq 302 aa
MGTSYELLVMKLRARDLYDSFEKMTGEGCLLVIVLDVHPQLAEQHTFVHSYFNAVISFAN
IHLAFNRMNRVAIVAANHLETRFLYPQTTGEKVDRQKDGRLEYLNHVDESIEEELKQMLS
RDHNARQTESLLSGAICRGLLYIKRLESEEAISRRINARLLVIKYSSDTGSQYLNYINTY
LSAQKIGAAVDVCVIGSDCGLLQQGADISGGYYYCLQEISELLQTLIMMYQPDIATRKKL
NAPPPESVDYRAACFCHHTLVDMGNVCSNCLSVYCRAVPLCSTCDVIFQTDRPLMKALKK
KK
NT seq 909 nt   +upstreamnt  +downstreamnt
atgggaaccagttacgagttgttggtgatgaaactaagagctcgagacctctacgattct
tttgaaaaaatgactggcgaaggatgcctgcttgtcattgtacttgatgtacatccacag
ttagcagaacaacatacttttgttcatagttacttcaatgccgttatttcatttgctaat
atacatctagcattcaatcgtatgaacagagtggcaattgttgcagccaatcacctagag
acccgttttttatatccccagacaacaggagaaaaagtagaccgccagaaagatggaaga
ctggaatacttaaatcatgttgatgaaagcattgaagaggaattaaagcaaatgctttca
cgtgatcataatgccagacaaacagaatccctcctctctggagctatttgtcgaggactt
ctgtatattaagaggctggagagtgaagaagcaattagtcgaaggataaatgctaggcta
ttggtgataaaatattcatctgataccggaagccaatatctaaattacatcaacacttat
ctaagtgcgcagaagattggcgcagcagttgatgtttgtgtgattggcagtgactgtggg
ctcttgcagcagggagctgatatcagtggaggatattattattgtctccaagagatttca
gaactccttcaaacattaattatgatgtaccaaccagatatagcaacaagaaagaaactt
aatgctcctcctccagaaagtgtggactaccgtgctgcttgtttttgtcatcacacatta
gtagatatgggtaatgtgtgttccaactgcttatcagtttattgcagagctgtaccttta
tgttctacatgtgatgttattttccaaacagatcgacccctcatgaaagcactgaaaaag
aagaagtga

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