Macrobrachium nipponense (oriental river prawn): 135208425
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Entry
135208425 CDS
T09903
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnz04131
]
135208425
Membrane trafficking [BR:
mnz04131
]
Protein recycling
Others
EARP complex
135208425
Endosome - Golgi transport
Tethering complex
GARP complex
135208425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Syndetin_C
COG4_N
Baculo_PEP_C
Sec8_N
NPF
DUF713
VPS51_Exo84_N
Motif
Other DBs
NCBI-GeneID:
135208425
NCBI-ProteinID:
XP_064096645
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All DBs
Position
35:12051952..12359956
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AA seq
940 aa
AA seq
DB search
MLISVIASVHDVPNSAEFAMNRLTLYAKVTHPNNNTSVQSDRTLWLLTGTDRQTDRRIRA
TERPFEVLMMEPDTMTDVEKLNLDFPPEVVQAIQEILPSDDPFDAPEFNTVEYINTRFPA
EQSLHHIDDVLEEMRLRITSTDDQIRTVVRSLTNVDQDGRASLLNAQEAIAELFTRFQDI
KERAGESEQRVKEITRDIKQLDTAKRNLTTSITTLNHLQMLVEGVQKLEALKVRREYGEI
ASLLQGVMNVLEHLNRYRHIPQVADLARQEERKKLTQGLHCCIPHESYVDQIRGELEKQI
LEDFHRAFHGPNARRFTPTKELAEACLVVSELDPKVKRTIIEDVIKTQLAEYEVLFAGGE
SDAWLTKVDLRRKWLLKTAVEFEKTLAAMFPPSWQVPARLALSFCEVTRSQLSHAMELRS
QDIDVGTLLHAHKVMSELESLLIRKYAGFQPYDRTPRNSISTNPFIEDEKTESTNPFESE
ASGETPVSPFQGAVCRCFQPYLKVYIENVDKRLSEQIEKFANDMKNYKFEHIDAEESNVV
PCCGELFTIYKTVLVEFLRLGPGESLGGLVEVFQKHLREFCTRVLRATLPRVGANIPMPK
DINMKELTAVLAQVQTLWREGDSPKLVDDDVRRVCSVLVSAEYCEEMTGRLEAKLKERSP
APLANTISLTQEQDLFHAVLAQCIALLVTHVECLCEPALTSMTKVNWMMEQTGDQSPYVT
AIAQHISSSVPLVRHNLHTSRKYFTRFCDKLAAAILNKFVQQVYKCRPISGVGCEQLLLD
CHALKAVMLQLPVVNSQVRRDPPQTYTRMVGRGMARAELVLQVVMGEYATQGDLVDKFHR
LLPDATIADFQKVLEMRGVKDRASVLELYRQRTMASVTESPLRNPATPSSGSQTPTVQPV
INQASQVVNTIVSSSVQSPEHEMSKIARLERMLKSRRLIS
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgttaatcagcgttatcgcctcagttcatgacgtaccaaactctgcagagttcgcaatg
aataggctgacactctatgctaaagtaacgcacccaaataacaacacttcagttcagagc
gaccgcaccctttggttgttgacaggcactgacagacagacagacagacggatacgtgca
acagaaagaccgttcgaagtgctaatgatggagccggatacaatgacagatgtggagaaa
ttaaacttggattttcctcctgaagtagttcaagccattcaggagatattgcctagtgat
gacccatttgatgcgccagagttcaatacagttgaatatattaatacaagatttccagca
gagcagtctcttcatcacattgatgatgttttggaagaaatgagattgagaataacttca
acagatgaccagatcagaactgttgttaggtcattaactaatgtagaccaggatggacgt
gcctcattgctaaatgcccaggaagccattgcagagctgttcactcgttttcaggatata
aaagaaagagctggggaatcagaacagagagtgaaagaaataaccagagacatcaagcaa
ctggatacagcaaaaagaaatcttactacctctattacaacactgaatcacctacagatg
ctagtggagggagtacaaaaattagaagccctaaaagtacggcgtgaatatggggaaata
gcaagtcttcttcaaggtgtcatgaatgtattggaacatttaaaccgatatagacatatc
ccccaagttgcagacttggccagacaggaagaaagaaaaaagcttacgcagggtcttcat
tgctgcatacctcatgaatcatatgttgatcaaattcgaggagaattagaaaaacagatt
cttgaagatttccatcgtgctttccatgggccaaatgcacgacgatttactcccacaaaa
gaattagccgaagcttgcctagtggtttcagagttggatccaaaagtcaagcgaacaatc
attgaagatgtaattaaaacacagttagctgaatatgaagttctgtttgctggcggagaa
agtgatgcatggttaacaaaagtagatttacggcggaagtggcttcttaaaactgctgta
gaatttgagaagactcttgccgccatgtttccaccatcttggcaggttcctgcaagactt
gccctttcattctgtgaagtaacaagatctcagctctctcatgcaatggagcttagatca
caagatattgatgttggaacacttcttcatgctcataaggttatgtctgagttagaaagt
ctgctcattagaaaatatgcaggatttcagccttatgaccgtaccccaagaaattcaata
tcaacaaatccttttattgaagatgaaaaaacagaatcaacaaatccttttgaaagtgaa
gcatcgggagagacaccagtctctccttttcaaggagctgtttgtagatgtttccagcca
tacctcaaagtttatattgaaaatgttgataaacgcttgagtgaacaaatagagaagttt
gccaatgacatgaagaactacaaatttgaacatatcgatgctgaagagtctaatgtggtt
ccatgttgtggagagcttttcaccatttataagaccgtcttagttgaattcttgcgatta
ggacctggtgaaagtttgggaggactggttgaagtgtttcaaaagcatttaagggaattc
tgtactagggtcctccgtgcgactcttcccagagttggtgctaatattccaatgccaaag
gatattaatatgaaggaactcactgccgttttagctcaggttcagacattgtggcgagaa
ggggatagtcctaaattagttgatgatgatgtgcgccgtgtttgttctgtcttagtatct
gctgagtattgtgaagagatgacgggacgtttagaagctaagcttaaagaacggagtcca
gcaccattggcaaatactatcagtcttacccaagaacaagatctttttcatgctgtttta
gcacagtgcatcgcattgttggtaactcatgttgagtgcttatgtgaaccagctttaact
tcaatgaccaaggttaactggatgatggaacaaactggtgaccaaagtccatatgtgaca
gccattgcacagcacatatcatcatctgtacccctagttaggcataacttacatacctct
cgcaagtactttacaagattttgtgataaattggctgctgcaatcctcaacaaatttgtt
caacaggtttacaaatgtcgtcccattagtggtgttggatgtgaacagctcttactagat
tgccatgccttaaaagcagttatgcttcaactaccagttgttaattcccaggttcggcgt
gaccctccacaaacatacacacgaatggttggaaggggcatggcacgagcagagctagtt
ttgcaggtcgtgatgggtgaatatgcaacacaaggtgatctggttgataagtttcaccgt
cttctccctgatgcaactattgctgacttccaaaaggtgctagaaatgaggggagtgaaa
gatagggcatcggtgctagaactttatcgacagcgcaccatggcatctgttacagagtct
cccttacgcaatcctgctactcctagtagtggcagtcaaactcctactgtgcagccagtg
ataaatcaggcttctcaagttgtcaacacaatagtgtccagttctgttcaaagtcccgag
catgagatgagcaaaattgcacggctagaacggatgctcaagtcaaggagacttataagt
tga
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