Macrobrachium nipponense (oriental river prawn): 135208615
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Entry
135208615 CDS
T09903
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135208615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnz03021
]
135208615
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135208615
Transcription machinery [BR:
mnz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
135208615
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
135208615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCHC
zf-CCCH_3
zf-CCCH_2
zf-CCCH_4
zf-CCHC_4
zf-C2H2_10
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
135208615
NCBI-ProteinID:
XP_064097056
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All DBs
Position
35:35810749..35818882
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AA seq
277 aa
AA seq
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MEILVANVDNITFDIENQLEEQIGAQMLPFPGMDKSVAAVCTFYLRGSCNKSVNCPFRHV
RGDRTVVCKHWLRGLCKKGDQCEFLHEYDMSKMPECYFYSRFNACHNKECPFLHINPDLR
IKDCPWYDRGFCRHGPQCRNRHVRRVLCMNYFSGFCPDGPNCKFMHPRFELPQVMEERTT
SGKNREITCHYCGEAGHKASHCPKSNPELREQNAIISLASGGPKTQGGKENAGPIPLPHH
LNDNNRLENIVCFKCGQQGHFANRCTKGQFAFLSSTN
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggagattcttgtggcgaatgtggataatattacgtttgatattgaaaatcaactcgaa
gaacagataggagctcagatgcttcctttcccaggaatggataaatctgtagctgctgta
tgtacattctatctccgtggaagctgcaacaagagtgtcaattgtcctttccgccatgtg
cggggagatcgtacagtggtttgcaaacattggcttcgtggtttgtgcaagaagggtgac
caatgtgaatttcttcatgaatacgacatgtctaaaatgccagagtgttacttttattcc
agatttaatgcctgtcataataaggagtgccccttcttgcatataaatccagatttgaga
ataaaagattgtccatggtatgacagaggcttttgtcgccatggccctcagtgcaggaat
cgccacgttcgccgtgttttgtgtatgaactacttttctggattttgccctgatggtcca
aattgcaaattcatgcatcccagatttgagctgccccaggttatggaagagagaactact
tcaggaaagaatagagagataacctgtcactactgtggagaagctggccataaagcttca
cactgtccaaagtcaaatcctgaactcagagagcaaaatgctattattagtcttgcttct
ggaggtccaaaaacacaaggaggcaaagaaaatgctggtcctatacctctgccacatcat
cttaatgataacaacagattagaaaacatagtttgctttaagtgtggtcaacaaggacat
tttgccaacagatgtactaaaggacagtttgctttcctgagttccactaactga
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