Macrobrachium nipponense (oriental river prawn): 135208873
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Entry
135208873 CDS
T09903
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
135208873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnz03021
]
135208873
Enzymes [BR:
mnz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
135208873
Transcription machinery [BR:
mnz03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
135208873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF4019
IL10
Motif
Other DBs
NCBI-GeneID:
135208873
NCBI-ProteinID:
XP_064097530
LinkDB
All DBs
Position
35:complement(22686037..22881244)
Genome browser
AA seq
1340 aa
AA seq
DB search
MGISRNLLLGTSQKDVTCETCAKNLSECIGHYGYLDLAKPVYHVGYFKNTIHILQNICKT
CAHVLLKPKDKSQLCEQAKRTVSYLQKKALYKRINELCKKMSLCPYCNAQNGVVKKLPPL
KIVHEKFRSVKKGDPMITDYFSQFDTALEYNKDLESQLSATVVEFLNPSQVLDLFERIPL
VDLPLLCMDQRFSHPKDLILTRLLVPPNCIRPSVISELKAGTNEDDITVMLAEIVFLSNI
LNKRSAGKVQSIQDSWEALQLHVAFLINSEISVPHDLSMAKKNSRGFVQRLKGKQGRFRG
NLSGKRVDFSSRTVISPDPNLRINEVGVPVEVAKLLSYPEKITAHNIALMRQLVKNGPDV
HPGALFVEQRSTPGTKKSMRYVNRERMAAELKQGDIVERHLMDGDIVLYNRQPSLHKMSI
MSHRVRVLPWRTFRFNECVCTPYNADFDGDEMNLHVPQTEEARAEALVLMGVTSNLVTPR
HGALIIGATQDFLTGSYLLTQKDQFFDKEHTCALITSILAGKETTYKIDLPPPAIMKPQQ
LWTGKQIFSLIIRPNQKFPVQCNLTTKRKDYTHGEELCSNEAWVIIRNSELLAGALDKSL
LGSGSKKNIFYVIKKDYGDIYAADAMWRVARLSTLYLMNQGFSIGIGDVMPGTGLLTRKQ
ELLDDGYGKCDEFISQLKEGTLHCQPGCTAEETLEQLILKELSTIRDKAGKACVMELHKT
NAALIMAISGSKGSFINISQMIACVGQQAIGGKRVPNGFEDRALPHYERHSKIPAAKGFV
SNSFFSGMTPTEFIFHTMAGREGLVDTAVKTSETGYMQRRLVKSLEDLYVAYDMTVRNST
QDIIQFKYGGDGLDPTEMEGSVGPIDLERLLDHIRAKSPCSAEDPLTGSEILQLADKYLA
EDLFKELSPEFKKELKNFMEKFSKRVDKIRSRLSRSKNRKILPVERHLERLSFTQLINFL
NACLDRYQGAVMEPGTAVGALCAQSIGEPGTQMTLKTFHFAGVAAMNITLGVPRILEIIN
ASRSISTPIITAKLKCDTDPEKARQVKGRIEKTLLGEVCEYVEEVFLPDDCFLLLKLAMD
RIRLLKVEVDAHSIKYAICTSKLKIKESDVCVESDTIITVRPSRTKASAMYYQLQHLKQH
ITKVIIKGLPSVNRAVINQIDSGSGGARYELLVEGDNLQEVIATYGVEGTRCTSNNTYEV
FSCLGIEAARATVIKEITATMENHGLSVDHRHVMLLADLMTCRGQVLGITRHGLSKMKES
VLMLASFERTADHLFDAAYHGQSNPIKGVSDCIIMGKPMNIGTGVFKLLHKHTRDAKLKS
RSLVFDHPEMHIPAINRGWP
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcagtcgcaacttgttgttgggtaccagccaaaaggatgtgacttgcgaaact
tgtgcaaagaatctgtcggaatgcattggtcattatggatacttggatcttgcaaaacct
gtttatcatgtcggatactttaaaaataccatacatatacttcagaatatttgtaagaca
tgtgctcatgtcttattgaaaccgaaggataagtcacaactctgtgaacaagcaaagaga
acagtgtcatatttacagaagaaggctctctacaaacgtattaatgaactctgcaagaaa
atgtctctctgcccatattgtaatgctcaaaatggtgttgtgaaaaagctcccacctttg
aaaattgttcatgagaaattcaggtctgtcaagaaaggagatccaatgataactgattat
ttttctcagtttgatactgctttagaatacaacaaggaccttgaatctcagttatcagca
actgttgtggagtttctcaaccctagtcaagttctagatctttttgaaaggattcctctt
gtggatcttccactactgtgcatggatcagcgtttttctcatcctaaagatttgattcta
acaagattgttggtacctccgaattgcatacgtccatcagtgatatcagaattaaaagca
ggaacaaatgaagacgacattacagttatgttagcagaaattgtatttttgagcaatatt
ttgaataagcgcagtgctggaaaggtacaaagcatccaagattcatgggaagcgttacag
ctccacgttgcattcctgataaactctgaaatatctgtgcctcatgacttatccatggcc
aaaaagaattcccggggttttgtccagagactgaaaggaaagcagggacgtttcagagga
aatttatctggaaagcgagtagatttctctagtcgaactgtgatatctcctgacccaaat
ctcaggatcaatgaggttggtgttcctgtggaagtggcaaagcttctttcataccctgag
aaaataacagctcataatattgccttaatgagacagttagtgaagaatgggcctgatgtt
catcctggtgcattatttgttgaacaacgctcaacaccagggacaaaaaagtctatgaga
tatgtaaacagagagagaatggcagcagagctaaagcaaggggatattgttgaaaggcac
ttgatggatggtgatattgttttatataatagacaaccatctcttcacaaaatgagtatc
atgtcacacagagtacgtgttttaccgtggcgaacattcagatttaatgaatgtgtctgt
actccatacaatgctgattttgatggtgatgagatgaacttgcacgttcctcagacagaa
gaagcacgtgctgaggctttagttctgatgggggttacatcaaatttggtaacgccacga
catggagctcttattattggtgccacccaggatttcctcactggttcatacttgttaaca
cagaaagatcagtttttcgacaaagaacacacctgtgctcttatcacgtcaatcttggca
gggaaggagaccacttacaagatagatctcccccctccagcaataatgaagcctcagcag
ttgtggactgggaaacaaatattcagtttgataattcgaccaaaccagaagtttccagtt
cagtgtaatttaacaactaaacgcaaagattacacccacggtgaggaattgtgctccaat
gaggcttgggtcataatacgtaattctgaacttctagcaggagcccttgataagtcactt
ttgggctctggttcaaagaaaaacatattttatgttatcaagaaggattatggtgatatt
tatgcagctgatgctatgtggagagttgcaaggctctctaccctatatttgatgaatcaa
gggttttcaattggcattggagatgtcatgccaggaactggtttgttaactaggaaacaa
gagcttcttgatgatgggtatggtaagtgtgatgaattcattagtcagttgaaggaaggc
accttgcattgtcaacctggttgtacagctgaagaaacactggagcagttgatcttgaaa
gagctcagcacaattcgtgacaaagcaggaaaagcttgtgtcatggaattgcacaagact
aatgcagcccttattatggccatctctggttcaaaaggatcttttatcaatatttctcag
atgattgcttgcgttggtcagcaagctattggtggcaaaagagtacctaatggttttgaa
gacagggctctaccccattatgagaggcattcaaaaataccagcagccaaaggatttgtc
agcaatagctttttctctggaatgacaccaacagagtttatttttcacaccatggctggt
cgtgaaggcttagttgacacagctgtgaaaacttcagagacaggctacatgcaaagacgt
cttgttaaatctttagaagatttgtatgtagcctatgatatgactgttcgtaattcaacg
caagatataattcagttcaaatatggaggtgatggacttgatcccactgaaatggaaggt
tctgtaggtcctatagacctagaacgtcttttagatcatattcgtgccaaatcaccatgc
tctgcagaagatcctctcactggaagcgaaatccttcagctggcggacaaatatttggct
gaggatttatttaaggagttgtctcctgagttcaaaaaggaattaaagaactttatggaa
aagttctcaaagcgagttgataagattcggtcccgtttgagtaggagcaagaatcgtaaa
attttgccagttgaacgtcatttagaacgcctgagcttcacccagttgataaattttcta
aatgcttgccttgatagatatcagggggctgtaatggaaccaggtactgctgttggagct
ttgtgtgcccagagtattggtgaacctggtacccaaatgacactgaaaactttccatttt
gctggtgttgctgctatgaatatcacacttggtgttccaagaatcttggaaattattaat
gcatcgcgaagcatatcaactcccattatcacagcaaagctgaagtgtgatacagatcct
gagaaagcacgtcaagtgaagggacgaattgagaaaactcttctaggagaagtctgtgaa
tatgttgaggaggtctttttgccagatgactgttttcttttgttgaagctcgctatggat
cgtattagattactgaaggtggaagtagatgctcattcaataaaatatgcaatatgcact
tccaagctaaagatcaaagaaagtgatgtatgtgttgaatctgatactattatcactgtt
agaccatcaagaaccaaagcatctgcaatgtattatcagctgcaacatcttaagcagcac
atcacaaaagttatcattaaaggattgccgtctgtaaatcgtgctgtcattaaccagata
gacagtggttccgggggggctcgttatgaactcttggtggaaggagataaccttcaggaa
gtcattgccacatatggtgttgagggtacaaggtgcacatccaacaacacatacgaggta
ttctcatgtcttggaattgaagctgccagggccacagttataaaggagataacagcaacc
atggagaaccatggactgagtgttgaccatcgtcatgtaatgctgctcgcagatttaatg
acttgcagaggccaggttttaggcatcacacgtcatggactttcaaaaatgaaggaatca
gttctcatgctggcttcgtttgagagaacagccgaccacctgtttgatgcagcctaccat
ggtcaaagtaaccctatcaaaggtgttagtgattgcatcatcatgggaaagccaatgaac
atagggacaggggtatttaaactgttacataaacataccagagatgcaaagttgaaatct
cgaagtcttgtttttgaccatccagaaatgcacattcctgctataaatagagggtggccg
taa
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