Macrobrachium nipponense (oriental river prawn): 135209406
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Entry
135209406 CDS
T09903
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mnz03036
]
135209406
Enzymes [BR:
mnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
135209406
Chromosome and associated proteins [BR:
mnz03036
]
Eukaryotic type
Meiosis-specific proteins
Others
135209406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
SNRNP200_wHTH
Helicase_C
PDE8A_N
Motif
Other DBs
NCBI-GeneID:
135209406
NCBI-ProteinID:
XP_064098170
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All DBs
Position
11:complement(93073697..93359574)
Genome browser
AA seq
1680 aa
AA seq
DB search
MSRLEERLRPVRLHRVVLGYDCNESWSDFRFEISLNYKLPSVIATYSNNKPTLIFVSTRK
SAQTTASALIQHARFVRDAQHKQLLLTVANSLRDSRLRECVMCGVGYHHAGIEVQDRRYI
EELFITGELLVLVATSTLAVGVNLPAHLVIIKSTAQYVGGSYQEYSCAQLLQMTGRAGRP
QFDSEATAVIMTKKQHKTKYENLVNGKDVLESYLHFNLVEHLNAEIVLGTVTDLAVAVEW
LRSTFFYVRVQHNPRHYGLPLNMKPSQLEAKLQELCTREVNGLSRAGLIVLDEMDVKPTT
PGKLMARYCVTFTSMKTFLELRGDESLKELVEILSACREFRDIKVRMSEKRVLNELNKSS
NSSVRFPIIGKIKTREQKINCLIQAVFGSLNIVDPGLNQDSAKIMRTGQRITKCLTEYGA
TRSDYELQLNTVLLAKSFACKLWENSRHVTRQLDRIGQTLSAALVQAKITSFTALEETTP
RNIELILNRQPPFGNRIREQAVKLPRYELMLEQLNEVRATESDLKVTIRLANHAELREGA
TTPKHHSSRLIIGDMDNHVVFQQRITDNALMVAGSVTRELTVTRASSGDELAVNFISETW
AGLDVQSSYTPRYLTKPPASTPMSLSSSASSVGALPSATPFSNAERFSGGTGTTKRTTLE
EGRRACLHTCNNKRTCAHICCKSGVTVQASCGPGTRSTSGNSKGNVPVYVQGIRQKASQM
QGPAPKKLRMTSSSGNVLSKFQFTPRGPMLMPKPAPRVAEKQFYSGTSQTCVYKENSSAH
KQPVVEGLSHMPVNPGGNVEESVDSFPDMEVFNDLEDGDNYEDAFNDSLEMSEIPDIQDK
DGPHSFISSSLSQKSSISQSSGVGVPSANTVNSNFFTKASTLGTTSKPYRQQQQRKQQRL
QEQNQQKSKMKSYNGNQTRQGGQLSLDRWLQNSQNIKVGSQISPAKAQGAGEARTPLFCH
VHSLTRGQNSLNTNANIATNQGVTQFMTGNKEMPVSSAQTYGIRTKKTITFEVPCQQQTS
VSNSQTLQIPKVFKQGNIGFQASCPRFGIPATQDTFLSQNNCNIPLSNPNLKGTTESAST
SGEHLEKASKPLSSSPKFGFTQMEMARNATITGASITQTTFVVPPSTNSVCNPSNLNSHK
SQNVIDNLRKTQDLIDMLKTQTENLEALQKSIHLEYGGSSAETRSQNSSAIVLPDQNTKC
SLDGVNQFMKKSSDNKWENLQFSNREGKNTSQYSQQRSLNASNEPVSSEGQRQKSYGGFI
ANFDRGNQVTSGEQKLNYLPAKLGLHHDKPVMGVKPMITKDSHMPRSQARGAKDVFPQLT
KQFKSSEQLRDQCKPSGSAPKYPAMLNASFSANNLSTPVKEKLKAEWRDLEMFQWCRQQE
KRSLSNLYNEAVTTNLPATREIKQEMGCDFNNQKPDLDSLSQDLFADSPQEPLDKESSAQ
LYESELTARQEAFAYRQGSLYGRGEPSSLSLEPDPYSQPTGPSLSFHHAREKFLSKQMQN
SHPEKPVSFDTLSGSQLPRPLAEKREFKSPFKYMGATLPSQHQHVSSQLSSHLPPSNASH
LSSLGISSLQSLHSGSSSQAGTQNPGGLMSGTPRFQLTYGDTQTGVGVTSVGGFQQNINI
NLSNILPSVTPAHSNATSALSDATPRIEPLRGILKKTANTAETNSHDAWENRSDIFDGLI
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggttagaggaaagattacgtcctgtcaggctccaccgtgttgtactgggttat
gattgtaatgagagttggtctgattttcgttttgagatctctctcaattacaaacttcca
tctgtcattgccacttacagcaataataaacctactcttatttttgtttcaacccgtaaa
agtgcacagacaactgcttcagcattaattcagcatgcccgttttgttagagatgcccaa
cataaacagctgttgctgactgttgctaattctctcagagatagcagattgagagaatgt
gtcatgtgtggagttggttatcaccatgctggcattgaagtccaagataggcggtatatt
gaggaacttttcattactggagagttattagttttggtagctacaagcaccttggctgtt
ggtgtcaatttaccagcccatcttgttatcatcaagagcacagctcagtatgtgggtggt
agttatcaagagtactcttgtgctcagttactccagatgactggacgtgctggtaggccg
cagtttgatagtgaagcaacggctgttatcatgaccaagaaacagcataagaccaagtat
gaaaatctagtgaatggcaaggatgttttggagtcttatcttcacttcaatctggtggaa
catcttaacgcagagatcgtgctgggtactgtaacggatcttgctgttgctgtggaatgg
cttcgatccactttcttctacgtgagggttcagcacaaccctcgacattacggcctccct
ctcaatatgaaaccgtctcaactggaagccaaacttcaagaattatgtactcgcgaggtg
aatggtctgtctcgagctggtctgatcgtgctcgacgaaatggacgtcaaaccgacaaca
cctgggaagctcatggccaggtattgcgtcaccttcacctccatgaaaacatttttggag
ctgcgaggagacgagagcttgaaggaactggtcgagatattatcagcttgccgtgaattc
cgggatattaaggttcggatgtctgaaaagcgggtcttgaatgaattgaacaagagttcg
aattcttccgtccggttccccataatagggaagatcaagaccagggaacagaagataaac
tgtctaattcaagctgtgtttgggagcctgaatatagtggatccgggactgaatcaagat
tcagcgaagatcatgaggactgggcagcggattaccaaatgccttacagagtacggggcg
actcgaagcgattacgaattgcagttaaatacggtgctgctggcgaagagtttcgcttgc
aaattgtgggagaactcgaggcacgtcacccgtcagctggacagaatcgggcagaccttg
agcgctgcccttgtgcaggccaaaatcacatcttttaccgccctggaagagaccacgccg
aggaatatagagctgatcctcaaccggcagcctccttttggcaacaggataagggaacag
gcagtgaagcttccgcggtatgaactcatgcttgagcagttgaatgaggtcagggcaacg
gagagtgaccttaaagtgaccatcagactggccaatcacgccgaattaagggagggcgct
accactccaaaacaccactctagtcgtttgatcatcggggacatggacaatcatgtcgtc
tttcaacaaaggataactgacaacgcgctgatggtggctgggagcgtgacaagagagttg
actgtgacaagggcatcatcgggtgatgaattagctgttaatttcatctctgaaacgtgg
gctgggttagacgtgcagagcagctacactcccaggtacctcacgaagccacctgcttca
acgccaatgtcattgtcgtcatcagcatcgtcagtaggcgccttgccctcggcgacgccc
ttctccaacgctgagcgtttctcaggaggcaccggtacgaccaaaaggacaaccctcgaa
gaaggtagacgcgcctgtctacatacttgcaataataagaggacgtgcgctcacatctgc
tgtaagagtggtgtaactgtccaggccagttgtggaccaggaactcgaagtacctctggc
aacagcaagggaaatgtacccgtgtatgttcaaggtattcgccaaaaagctagccagatg
caaggtccagctcccaaaaaactcaggatgacaagcagttcaggaaatgtgctgtcaaag
ttccagttcactccaaggggtcctatgttaatgcctaaacccgcgccacgggtcgctgaa
aagcaattttacagtggaactagtcaaacttgtgtgtataaggagaattcaagcgcccac
aagcagcctgtggtagagggattgtcccatatgccagtgaatcctggaggcaatgtggag
gaatccgttgatagtttccctgatatggaagtttttaatgatttagaagatggagataac
tatgaagatgcttttaatgactctttggagatgagcgaaattcctgatattcaagataag
gatggcccacattctttcatttcatccagtctttcacagaaaagtagcattagtcagagt
tcaggagttggagttccttcagcaaacactgttaacagtaacttcttcacaaaagcaagc
actcttggtaccacttcaaagccatatcggcagcagcaacaaagaaaacaacaaagactg
caagagcaaaatcaacaaaagtctaaaatgaaaagttataatggtaatcaaacgaggcaa
ggaggacagttatctcttgacagatggctccaaaatagtcagaatattaaagtgggatcc
caaatatccccagcaaaggctcaaggtgcaggtgaagcacgtacgcctcttttctgtcat
gttcattctcttaccagaggtcaaaactcattgaatacaaatgcaaatatagcaacaaat
caaggtgttactcagtttatgactggaaataaagagatgccagtctcttctgcacaaaca
tatggaatcaggacgaagaaaacgataacatttgaagttccatgtcaacaacaaacaagt
gtctcaaactcacagaccttgcagattcctaaggtgttcaaacaaggaaatataggtttc
caagcttcttgccctagatttggtatacctgccactcaagatacttttttatcccaaaac
aactgtaatatacctcttagtaacccgaacttgaaaggcactactgaatcagcttccaca
agcggggagcatctggaaaaagcatctaaaccattgtcttctagtccaaaatttggtttt
actcaaatggaaatggcaagaaacgctacgatcactggagccagcattacgcagaccacc
tttgttgtaccaccaagtacaaatagcgtctgcaatccctcaaacttgaactcacacaaa
tctcaaaatgttattgataatcttcgcaaaacacaagatcttattgacatgctgaaaact
caaactgaaaacttagaagcattacaaaaatctattcatctggaatatggagggtcttct
gcagaaacaaggtcacaaaattcttctgcaatagtgctgccagatcaaaacactaaatgt
agtcttgatggagttaatcagttcatgaaaaagagtagtgacaataaatgggaaaatctc
cagttcagtaatagagaaggaaagaatacctctcagtattctcagcagagatctttgaat
gcgagcaatgaacctgtttcttctgaaggccaaaggcagaagtcatatggaggttttata
gcaaactttgatagaggaaaccaggtaacttcaggtgaacaaaaattgaattatttacct
gcaaaacttggtctccatcatgataaacctgttatgggtgttaaaccgatgattacaaaa
gacagtcacatgcctaggagtcaagcaagaggcgcaaaagatgttttcccccagctaact
aaacaatttaagtcatctgagcaattaagggaccaatgtaagcctagtggctctgcacca
aaatacccagctatgttaaatgctagcttcagtgccaacaatttaagtactccggtgaag
gaaaaattgaaggctgaatggcgtgaccttgaaatgttccagtggtgtcgtcaacaagaa
aaacgctcacttagtaatctgtacaatgaagctgtaacaaccaatttgcctgctacaaga
gagataaagcaagaaatgggctgtgatttcaataatcaaaaacctgatttagattccttg
tctcaagatctgtttgctgactctccgcaagaacccttagataaggaaagctcagctcag
ctttatgaatcagaactcactgctcgtcaggaagcttttgcatacaggcagggttcatta
tatggtagaggtgaaccatcatctctttccttagaaccagatccatattcacaacctact
ggccctagtctatcatttcatcatgcaagggagaagtttttaagtaaacaaatgcaaaat
agtcacccagaaaagcctgtgtcttttgataccttgtctggttcccagttgcctagaccc
ctagcagaaaagcgcgagtttaaatctccattcaaatacatgggggcaacactgccttcc
caacaccagcatgtatcctctcagctgtcaagtcatctccctcccagtaatgcctcccat
ctctcaagcttgggaatttccagtcttcagtctcttcactcaggctcaagctcccaagca
ggaactcagaatccaggaggtctgatgtctgggaccccgcgattccagttgacctatggg
gatactcagactggtgtgggagtgaccagcgtgggtggtttccagcagaatataaacatc
aatctgtccaatatcttgcctagtgttactccagctcatagtaatgccacttcagcttta
tcagatgcaacgccaagaattgaacctcttcgtgggatcttgaagaaaactgctaacact
gctgaaacaaattctcatgatgcgtgggaaaatcgttccgacatattcgacggcctaatt
tga
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