Macrobrachium nipponense (oriental river prawn): 135209604
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Entry
135209604 CDS
T09903
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnz03021
]
135209604
Transcription machinery [BR:
mnz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
135209604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_2
TPR_14
TPR_8
TPR_12
TPR_CcmH_CycH
TPR_16
TPR_17
TPR_11
TPR_10
TPR_6
TPR_Slam
ARM_TT21_5th
TPR_7
TPR_9
PknG_TPR
ARM_TT21_4th
ANAPC3
TPPII_C
SNAP
Motif
Other DBs
NCBI-GeneID:
135209604
NCBI-ProteinID:
XP_064098366
LinkDB
All DBs
Position
38:9178435..9259207
Genome browser
AA seq
1216 aa
AA seq
DB search
MSGCIEIPLRDSDEVIELDLTSLPDVEEVLGILTNEKVPLSYWVDLSIEYYKQKNEEAFV
RILEASRVDATLTGDSEKGQMRSYDTLAAYYVQKAYKEKEPQAKKDLFQKATYLYTTADK
IIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPNNIPSLLGKACIAYNKKDYRGA
LAFYKKALRTNPNCPAAVRLGMGHCFMKLGNQDKARLAFERALELDGMCVGALVGLAVLE
LNEKKPDHIRRGVQMLSKAYNIDSTNPMVLNHLGNHFFFKSDWAKVQHLCLHAFHNTENE
SMRAESCYQMARAHHVQEDYSQAFQYYYQATQYAPPNFVLPHYGLGQMYINRGDQENAAQ
CFEKVLKAQPGNYETMKILGSLYASSTSQSKRDLAKQHLKKVTEQMSDDVEAWIELAQIL
EGSDLQGSLAAYHKATKLLEDVIQMEIPPEILNNIAALHFRLGNYEEAQKHFKMAWDRCE
AEKQQEQPQYYSSISVTIKYNTGRLYEMFCQFDKAEKLYKEILQDHPNYVDCYLRLGCMA
RDRGQIYDASDWYKEALRMNNEHPDAWSLMGNLHLAKNEWGPGQKKFERILKNPSTTNDS
YSLIALGNVWLTTLHQPNRDKEKERKHQDRALAMYKNVLRSDPRSIWAANGIGAVLAHKG
YINEARDIFAQVREATADFSDVWMNIAHIYVEQKQYINAIQMYENCQKKFFKYPHVEVLG
YLARAYYKAMKLKEAKYTLLKARHVAPHDTVILYNLALVLQKLASQVLRDEKSNLKTVLA
AVHELTLAQKYFQHLSVNGDRLKYDLGAAAAEASQCRDLLSQAQYHVARARRQDDEEKAL
RRKQEEERNALKQKVIEERLKLEESRRQRLEEKIKEREIYKEKMKNAVIIQEVAEVSKKG
GRGRKRDYDILSDGSGPGSGDEGGAPKSKKSRGRKKKEPGERKKGRKKREAGSDDEDGTG
RGRQKKKGRKKSDEGLTAKQKGRIVSKATISDSSDDSDDARLKIASGSDSEGGGTNKRRR
VMSDSGSSRSRSRSKSGSRSKSGSRSRSRSGSGSRSRSRSGSRRSRSGSRQSRSSSRRSR
SGSRRSRSGSRRSRSGSRRSRSGSRRSRSGSRRSRSGSRRSRSGSRRSRSGSRRSRSGSR
RSGSGSRSRSRSGSRSPARSKSGSRSRSSSRSRSRSRSGSRSRSGSRSPARSGSGSPRSR
SGSRSPARSKSGNDSD
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggtgtatcgaaatcccgttgcgggatagcgatgaggtgattgaattagactta
acatcgcttccagatgtagaggaagttcttggaatcctcacaaatgaaaaagttccccta
agttactgggtagatttatctattgaatattacaaacaaaaaaatgaagaggccttcgta
cgtatacttgaagccagcagggttgatgccaccctcactggggattcagaaaaaggacag
atgcggtcatatgatactctggcagcctactatgtacagaaggcttataaagaaaaagag
cctcaagccaagaaagatcttttccaaaaggcaacgtacttgtacacaacagctgacaag
atcattatgtacgaccagaaccatctgttgggtcgtgcctatttctgccttctcgaaggg
gataaaatggaacaagctgatgcacagttcaattttgtgctcaaccagtctccaaataac
atcccctctctcctggggaaagcttgtattgcttataataagaaggattatcgaggagca
ttggcattttacaaaaaggctctgagaactaaccctaattgtccagcagcagtccgtctt
gggatgggtcactgttttatgaagttgggaaaccaggacaaagccagacttgcctttgaa
cgagctttagaactggacgggatgtgtgttggagcacttgttggtctggctgtactagag
cttaatgagaaaaaacctgatcacattcgtcgtggtgttcagatgttatcaaaagcgtat
aatattgattcaacaaatccaatggtcctcaatcacttgggaaatcacttcttctttaaa
tcggactgggccaaagttcagcatctctgcctacatgccttccataacacagaaaatgaa
tcaatgagagccgagtcttgctaccagatggctcgtgcacatcacgttcaggaagactat
tctcaggcctttcagtattattaccaggcaacacagtatgcaccaccaaactttgtcctc
cctcattatgggttgggtcaaatgtatataaacagaggtgatcaagaaaatgcagcacag
tgttttgagaaagtgttaaaagcgcaacctggaaactatgaaaccatgaagattttagga
tctttgtatgcaagttcaacttcacaaagtaaaagggatttagcaaaacaacatcttaaa
aaggtaacagagcagatgagtgacgatgttgaggcttggatcgagcttgcccagattctt
gaaggtagtgacctccaagggtcattagctgcatatcacaaagccacaaagctcctagag
gatgttattcaaatggaaattcccccagaaattttgaataatattgctgccctccacttt
agattaggaaattatgaagaagcgcagaaacatttcaagatggcttgggacagatgtgaa
gctgaaaagcaacaggaacaaccacaatattattcttccatatctgtaacaattaaatat
aatactggaagactttacgaaatgttttgtcaatttgataaagctgagaagttatacaaa
gaaattcttcaagatcatccaaactatgttgattgttatttaaggcttggttgcatggca
agagacagaggtcagatttatgatgcttctgattggtacaaggaagctttgcgtatgaac
aacgaacaccctgatgcctggtcgctgatgggaaacttgcatttagcgaagaatgaatgg
ggtccaggccaaaagaagtttgaacgaattttaaagaatccaagtacaaccaatgattcc
tactccttgattgcccttggcaatgtttggttaacgacactccatcagcccaatcgtgac
aaggagaaggaacggaagcatcaggacagagctttggcgatgtacaagaatgtgttgaga
tcagaccccaggagtatatgggcagcaaatggcattggtgctgtgttggctcacaaaggc
tacatcaatgaagctcgagacatatttgctcaagttcgagaggccactgcagactttagc
gatgtctggatgaatattgctcacatatatgtggagcagaaacagtacattaacgcaatt
cagatgtatgagaattgccaaaagaaattcttcaagtaccctcatgttgaagtgctgggt
taccttgccagggcttattacaaggcaatgaagttaaaagaagcaaaatatacattatta
aaggcaaggcatgttgctcctcatgacactgtaattctgtacaacttggctcttgtactt
cagaagcttgcatctcaggttttgagagatgaaaaatcaaatttgaagactgtcttagct
gctgtacatgagctaactttagcccagaagtacttccaacatctgagtgtaaatggtgat
cgattgaagtatgatcttggagcagctgctgcggaagccagccagtgccgtgatcttctc
tcccaagctcagtatcatgttgcacgtgcccgtcgacaagatgatgaagagaaggctctg
cgtcgtaaacaagaagaggaaagaaatgcccttaaacagaaggttatagaggagaggctg
aagcttgaggaatcaagacgtcagagattggaagaaaagataaaagaacgtgagatatac
aaggaaaagatgaagaacgctgtcattattcaagaagttgctgaagtgtccaagaaaggt
ggacgtggccggaaaagagactatgatattctctcagatgggtctggtcctggaagtgga
gatgagggaggtgctcctaagtccaagaaatctcgaggacgcaagaagaaggagcctggt
gagagaaagaaaggaaggaagaagagagaggctggaagtgatgatgaagatggtactggc
agaggcaggcagaaaaagaagggaagaaagaagagtgacgaaggcttaactgccaaacag
aaaggacgcattgtctccaaggctaccatttccgattcatctgatgactcagatgatgca
aggctcaaaattgccagtggatcagatagtgaaggaggaggaacaaacaagagaagacga
gttatgtcagactctgggtcgtcaaggtcacgttcacgctcaaagtctggttcccgctca
aagtctggttcccgctctcgatcacgttctggctcaggatcgaggtctcgaagccgtagc
ggttctaggcgaagtcgtagtggttctaggcaaagtcgtagcagttcgagacgaagtcgt
agcggttctaggcgaagtcgtagcggttcgagacgaagtcgtagtggttcgagacgaagt
cgtagtggttcgagacgaagtcgtagtggttcgagacgaagtcgtagcggttcgagacga
agtcgtagtggttcaagacgaagtcgtagtggttcaagacgaagtcgtagcggttcaaga
cgaagtggatcaggctcgaggtcaagatcaagatcaggcagtagatcaccagctagatca
aagtcagggtcaagatcaaggtctagttcacgatctcgttctcgttcaaggtctggttcc
aggtcaagatcgggttcgcgttccccagctaggtcaggatctggttcgccacgctctaga
tctggatccaggtctcctgctcgttcaaaatctgggaacgatagcgattaa
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integrated database retrieval system
