Macrobrachium nipponense (oriental river prawn): 135209982
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Entry
135209982 CDS
T09903
Name
(RefSeq) regulator of nonsense transcripts 3B-like isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03013
Nucleocytoplasmic transport
mnz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135209982
03015 mRNA surveillance pathway
135209982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135209982
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
135209982
mRNA cycle factors
P-body specific factors
135209982
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
135209982
NCBI-ProteinID:
XP_064098774
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Position
39:151138..172285
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AA seq
586 aa
AA seq
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MTEEMFIESVSPLAEHDYFAFINADSSLGSSAYSRAYINFKNVEDVYIFYDKFDGYVFVD
QKGNEHPAMVEYAPFQKIPKRSGGKKKDARCGTIDEDADYLAFLESLTKPVTITLPPLEA
VLEEIQAHDRELKANNGLIKVKTPLLEYIEQRKAEKLRSKEEKKEERRRKELERKKAREE
ERKKKKEIREHHKEMKKEQQKDDNSVKVLRPERGKDDYVSEGRQERSKADRDKERQKREE
ERLKIRKEKEKLRREREKEERLRRLEDKAKHREEEKLKHKDDVLEEAQEEKVLASKPEGS
KSKRYSEGRRKEREKDKVKEEKERERKPKEEHDDVEIETLEENMNLENTPEKEEIDSSRK
EEKSEEKVPSRKRREKDPRVERRIRNKDRPAMALYRPGQSRLSSRMRQDREEGAETSSSS
PSPVMPAGDQKKLPSSRKENTDSSRSDCKEESTKTISITDDISESKSTTEISQDDRSSGE
GTGEKATGNQKHSDDWKDDDDDDDDDDDDGENDENEENISDIKEGKDEKDSQMQEPLEDA
DLVDEAHSSSDSTHNKADDSLGSISKDVKKYPGVKSMTFRRSVSRE
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagaaatgtttatcgagtccgtgtcgccacttgcagaacatgattattttgct
tttattaatgcagatagcagtcttgggtccagtgcttatagtagagcttacatcaacttc
aagaatgtagaagatgtttatatattttatgacaagttcgatggttatgtttttgtagat
cagaagggaaatgaacatccggccatggtggagtatgcaccttttcaaaaaattcccaaa
agatctggtgggaagaaaaaagatgctagatgcggtaccatcgatgaagatgctgactac
cttgcatttctggagtccttgacaaaacctgtaactatcacacttcctcctctcgaagct
gttcttgaagaaatacaagcacatgacagggaactgaaagcaaacaatgggttgattaaa
gtgaaaactcctctgcttgaatacattgagcaaaggaaggcggaaaagcttcgcagtaaa
gaagagaagaaagaagagaggagaagaaaagaacttgagcgcaagaaggccagagaggaa
gagaggaagaagaagaaggaaataagggaacatcataaggagatgaagaaagaacaacag
aaagatgataactctgtaaaggttttacgaccagaacgaggcaaagatgattatgtctca
gagggacgccaggagaggtcaaaagctgatagagacaaagaaaggcaaaaacgagaagag
gagaggctgaaaatacgaaaagaaaaagagaaacttcgacgtgaaagagagaaagaggaa
aggttacgaagattggaggacaaagcaaaacatagagaagaggagaaattgaaacataaa
gatgacgtcttagaagaagcacaggaagaaaaagtgcttgcaagtaagcctgaagggtca
aaatcaaagcgttatagtgagggtagaagaaaagagagagaaaaggataaagtaaaagaa
gagaaagagagggaaaggaaacccaaggaagaacatgatgatgttgaaattgaaacttta
gaggaaaatatgaatttggaaaacacaccagaaaaagaggaaattgattcttcaaggaaa
gaggaaaaatctgaggagaaggttccgtccaggaaaagaagagaaaaagatccgagagta
gaaaggagaatacgaaataaagatcgaccagcaatggctctctatcgaccaggtcagtca
cgtcttagcagccgcatgcgtcaagatcgtgaggaaggagcagaaacctcttcatctagt
ccaagccctgtgatgcccgctggggaccaaaagaaattaccttcttcaaggaaggaaaat
acagattccagtagatctgattgtaaagaggaatcaacaaaaactataagtattaccgat
gatatatctgagagtaaatccactactgaaataagtcaggatgacagaagcagtggtgaa
ggtacaggggagaaggctactggaaaccaaaagcactccgatgattggaaagatgatgac
gatgatgatgatgatgatgatgatgatggtgaaaatgatgaaaatgaagaaaacatatca
gatattaaagaaggaaaagatgaaaaagacagtcaaatgcaggagccacttgaggatgct
gaccttgttgatgaggcccattcttcttcagatagcacgcacaataaggcggatgatagt
ttaggaagcatttccaaagatgtaaaaaagtaccctggggttaaaagcatgacatttagg
agaagtgttagccgagagtga
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